External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Transcript | Exons | Introns | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
APO3
AT5G61930.2
1964 |
|
|
||||||||||
APO3
AT5G61930.1
2511 |
|
|
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G61920:exon:10 | 394 | Chr5: 24865005-24865398 | Arabidopsis thaliana |
AT5G61920:exon:7 | 905 | Chr5: 24864494-24865398 | Arabidopsis thaliana |
AT5G61920:exon:5 | 1097 | Chr5: 24864302-24865398 | Arabidopsis thaliana |
AT5G61920:exon:11 | 148 | Chr5: 24865481-24865628 | Arabidopsis thaliana |
AT5G61920:exon:9 | 570 | Chr5: 24864829-24865398 | Arabidopsis thaliana |
AT5G61920:exon:12 | 539 | Chr5: 24865481-24866019 | Arabidopsis thaliana |
AT5G61930:exon:5 | 670 | Chr5: 24865086-24865755 | Arabidopsis thaliana |
AT5G61930:exon:3 | 899 | Chr5: 24866154-24867052 | Arabidopsis thaliana |
AT5G61930:exon:2 | 395 | Chr5: 24867280-24867674 | Arabidopsis thaliana |
AT5G61930:exon:4 | 978 | Chr5: 24866075-24867052 | Arabidopsis thaliana |
AT5G61930:exon:1 | 1533 | Chr5: 24867280-24868812 | Arabidopsis thaliana |
AT5G61940:exon:1 | 2181 | Chr5: 24867945-24870125 | Arabidopsis thaliana |
AT5G61940:exon:2 | 2155 | Chr5: 24867971-24870125 | Arabidopsis thaliana |
AT5G61940:exon:3 | 1971 | Chr5: 24868155-24870125 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G61930:five_prime_UTR:2 | 9 | Chr5: 24867666-24867674 | Arabidopsis thaliana |
AT5G61930:five_prime_UTR:1 | 1147 | Chr5: 24867666-24868812 | Arabidopsis thaliana |
AT5G61940:five_prime_UTR:1 | 31 | Chr5: 24867971-24868001 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G61920 | locus:2156146 | AT5G61920 | 1730 | Chr5: 24864290-24866019 | A. thaliana | FLX-like protein;(source:Araport11) | NULL | NULL | FLL4, FLX4 | |
AT5G61940 | locus:2156156 | AT5G61940 | 5010 | Chr5: 24867945-24872954 | A. thaliana | Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) | NULL | Ubiquitin carboxyl-terminal hydrolase-related protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G61920.4 | 799 | Chr5: 24864290-24865628 |
AT5G61920.3 | 868 | Chr5: 24864290-24865628 |
AT5G61920.2 | 1313 | Chr5: 24864290-24866019 |
AT5G61920.5 | 1155 | Chr5: 24864291-24865628 |
AT5G61920.6 | 1245 | Chr5: 24864302-24865628 |
AT5G61920.1 | 1348 | Chr5: 24864302-24866019 |
AT5G61930.2 | 1964 | Chr5: 24865086-24867674 |
AT5G61930.1 | 2511 | Chr5: 24866075-24868812 |
AT5G61940.2 | 3825 | Chr5: 24867945-24872915 |
AT5G61940.3 | 3662 | Chr5: 24867971-24872778 |
AT5G61940.1 | 3333 | Chr5: 24868155-24872765 |
AT5G61940.4 | 3654 | Chr5: 24868155-24872954 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G61920:three_prime_UTR:1 | 391 | Chr5: 24865629-24866019 | Arabidopsis thaliana |
AT5G61930:three_prime_UTR:3 | 670 | Chr5: 24865086-24865755 | Arabidopsis thaliana |
AT5G61930:three_prime_UTR:1 | 76 | Chr5: 24866154-24866229 | Arabidopsis thaliana |
AT5G61930:three_prime_UTR:2 | 155 | Chr5: 24866075-24866229 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
APO3_ARATH | function | May be involved in the stable assembly of several 4Fe-4S cluster-containing complexes of mitochondria. |
APO3_ARATH | similarity | Belongs to the APO family. |
Function
Gene Ontology
cellular component | |
---|---|
mitochondrion | ECO |
molecular function | |
RNA binding | ECO |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...