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Gene : AT5G01230 A. thaliana

DB identifier  ? AT5G01230 Secondary Identifier  ? locus:2150069
Brief Description  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
TAIR Computational Description  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes a tRNA methyltransferase that mediates the 2'-O-ribose methylation of selected tRNA species in the anticodon loop. Mutation of this gene compromises plant immunity against bacteria.
TAIR Short Description  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
TAIR Aliases  AtTRM7a, SCS9, TRM7a

0 Gene Rifs

1 Organism

3 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3864  
Location: Chr5:91838-95701 reverse strand

Gene models - AT5G01230 AT5G01230

? Gene models

Transcripts: 2  Exons: 23  Introns: 21 

Overlapping Features

? Genome features that overlap coordinates of this Gene

18 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
Q8GUN8_ARATH function Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
Q8GUN8_ARATH similarity Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. TRM7 subfamily.

2 Proteins

Function

Gene Ontology

cellular component
cytoplasm  ? ECO  
molecular function
tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase activity  ? ECO  
biological process
cytoplasmic translation  ? ECO  
tRNA nucleoside ribose methylation  ? ECO  
cell division  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets