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Gene : VEL1 A. thaliana

DB identifier  ? AT4G30200 Secondary Identifier  ? locus:2128946
Name  ? vernalization5/VIN3-like 1 Brief Description  vernalization5/VIN3-like protein
TAIR Computational Description  vernalization5/VIN3-like protein;(source:Araport11)
TAIR Curator Summary  Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.
TAIR Short Description  vernalization5/VIN3-like
TAIR Aliases  VEL1, VIL2

1 Gene Rifs

1 Organism

16 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3970  
Location: Chr4:14786532-14790501 reverse strand

Gene models - VEL1 AT4G30200

? Gene models

Transcripts: 4  Exons: 20  Introns: 16 

Overlapping Features

? Genome features that overlap coordinates of this Gene

13 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
VIL2_ARATH VIL2_ARATH-3 VIL2_ARATH-2 VIL2_ARATH-4 function Maybe involved in both the vernalization and photoperiod pathways by regulating gene expression. Binds preferentially to dimethylated histone H3 'Lys-9' (H3K9me2). Promotes flowering in non-inductive photoperiods (e.g. short days) through the maintenance of the epigenetically repressed state of MAF5 via H3K9me2 and plant homeodomain / polycomb repressive complex 2 (PHD-PRC2)-dependent H3K27me3.
VIL2_ARATH VIL2_ARATH-3 VIL2_ARATH-2 VIL2_ARATH-4 subcellular location Probably DNA-associated.

4 Proteins

Function

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets