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Gene : FADA A. thaliana

DB identifier  ? AT4G27030 Secondary Identifier  ? locus:2116352
Name  ? fatty acid desaturase A Brief Description  fatty acid desaturase A
TAIR Computational Description  fatty acid desaturase A;(source:Araport11)
TAIR Curator Summary  Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol. The mRNA is cell-to-cell mobile.
TAIR Short Description  fatty acid desaturase A
TAIR Aliases  FAD4, FADA

1 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1258  
Location: Chr4:13571813-13573070

Gene models - FADA AT4G27030

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
FAD4_ARATH function Fatty acid desaturase involved in the production of chloroplast-specific phosphatidylglycerol molecular species containing 16:1(3E). Catalyzes the formation of a trans double bond introduced close to the carboxyl group of palmitic acid, which is specifically esterified to the sn-2 glyceryl carbon of phosphatidylglycerol.
FAD4_ARATH pathway Lipid metabolism; fatty acid metabolism.
FAD4_ARATH similarity Belongs to the fatty acid desaturase CarF family.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast membrane  ? ECO  
chloroplast  ? ECO  
molecular function
palmitoyl-[glycerolipid] 3-(E)-desaturase activity  ? ECO  
biological process
phosphatidylglycerol metabolic process  ? ECO  
unsaturated fatty acid biosynthetic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets