External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 9, Exons: 10, Five Prime UTRs: 5, Genes: 2, mRNAs: 4, Three Prime UTRs: 2, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G61370:CDS:1 | 69 | Chr3: 22707796-22707864 | Arabidopsis thaliana |
AT3G61370:CDS:2 | 80 | Chr3: 22707977-22708056 | Arabidopsis thaliana |
AT3G61370:CDS:3 | 235 | Chr3: 22708146-22708380 | Arabidopsis thaliana |
AT3G61370:CDS:1.1 | 69 | Chr3: 22707796-22707864 | Arabidopsis thaliana |
AT3G61370:CDS:2.1 | 80 | Chr3: 22707977-22708056 | Arabidopsis thaliana |
AT3G61370:CDS:3.1 | 235 | Chr3: 22708146-22708380 | Arabidopsis thaliana |
AT3G61370:CDS:1.2 | 69 | Chr3: 22707796-22707864 | Arabidopsis thaliana |
AT3G61370:CDS:2.2 | 80 | Chr3: 22707977-22708056 | Arabidopsis thaliana |
AT3G61370:CDS:3.2 | 235 | Chr3: 22708146-22708380 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G61370:exon:1 | 115 | Chr3: 22706242-22706356 | Arabidopsis thaliana |
AT3G61370:exon:8 | 364 | Chr3: 22708146-22708509 | Arabidopsis thaliana |
AT3G61370:exon:2 | 67 | Chr3: 22706290-22706356 | Arabidopsis thaliana |
AT3G61370:exon:4 | 61 | Chr3: 22707222-22707282 | Arabidopsis thaliana |
AT3G61370:exon:3 | 333 | Chr3: 22706312-22706644 | Arabidopsis thaliana |
AT3G61370:exon:5 | 136 | Chr3: 22707729-22707864 | Arabidopsis thaliana |
AT3G61370:exon:6 | 80 | Chr3: 22707977-22708056 | Arabidopsis thaliana |
AT3G61370:exon:7 | 235 | Chr3: 22708146-22708380 | Arabidopsis thaliana |
AT3G09645:exon:1 | 319 | Chr3: 22706363-22706681 | Arabidopsis thaliana |
AT3G61380:exon:10 | 910 | Chr3: 22708482-22709391 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G61370:five_prime_UTR:1 | 115 | Chr3: 22706242-22706356 | Arabidopsis thaliana |
AT3G61370:five_prime_UTR:2 | 67 | Chr3: 22706290-22706356 | Arabidopsis thaliana |
AT3G61370:five_prime_UTR:4 | 61 | Chr3: 22707222-22707282 | Arabidopsis thaliana |
AT3G61370:five_prime_UTR:3 | 333 | Chr3: 22706312-22706644 | Arabidopsis thaliana |
AT3G61370:five_prime_UTR:5 | 67 | Chr3: 22707729-22707795 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G09645 | AT3G09645 | 319 | Chr3: 22706363-22706681 | A. thaliana | Natural antisense transcript overlaps with AT3G61370;(source:Araport11) | NULL | ||||
AT3G61380 | locus:2098961 | TRM14 | TON1 Recruiting Motif 14 | 3596 | Chr3: 22708482-22712077 | A. thaliana | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein;(source:Araport11) | NULL | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related | TRM14 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G61370.1 | 695 | Chr3: 22706242-22708509 |
AT3G61370.2 | 579 | Chr3: 22706290-22708380 |
AT3G61370.3 | 784 | Chr3: 22706312-22708380 |
AT3G61380.1 | 2865 | Chr3: 22708482-22712077 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G61370:three_prime_UTR:1 | 129 | Chr3: 22708381-22708509 | Arabidopsis thaliana |
AT3G61380:three_prime_UTR:1 | 287 | Chr3: 22708482-22708768 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE92550 | 154 | Chr3: 22706611-22706764 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE92550:transposon_fragment:1 | 154 | Chr3: 22706611-22706764 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...