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Gene : HRGP1 A. thaliana

DB identifier  ? AT3G54590 Secondary Identifier  ? locus:2096976
Name  ? hydroxyproline-rich glycoprotein Brief Description  hydroxyproline-rich glycoprotein
TAIR Computational Description  hydroxyproline-rich glycoprotein;(source:Araport11)
TAIR Curator Summary  Encodes a hydroxyproline-rich glycoprotein. The mRNA is cell-to-cell mobile.
TAIR Short Description  hydroxyproline-rich glycoprotein
TAIR Aliases  ATHRGP1, EXT2, HRGP1

0 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2656  
Location: Chr3:20206128-20208783

Gene models - HRGP1 AT3G54590

? Gene models

Transcripts: 3  Exons: 6  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
EXTN2_ARATH developmental stage Early expressed in the whole plant, but was restricted to lower stems, flower buds and roots in the mature plant (6 weeks old).
EXTN2_ARATH function Structural component which strengthens the primary cell wall.
EXTN2_ARATH similarity Belongs to the extensin family.
EXTN2_ARATH tissue specificity Predominantly expressed in the roots.

2 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
primary cell wall  ? ECO  
molecular function
structural constituent of cell wall  ? ECO  
biological process
plant-type cell wall organization  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets