Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
RDR6_ARATH | function | RNA-dependent RNA polymerase involved in post-transcriptional gene silencing (PTGS). Possesses ssRNA and ssDNA-dependent polymerase activity, but does not have priming activity. Possesses in vitro 3' nucleotidyltransferase activity in the presence of UTP as single nucleotide. Required for the production of 21 nucleotide trans-acting small interfering RNAs (ta-siRNAs) derived from TAS1, TAS2 and TAS3 endogenous transcripts. Acts in the RDR6/SGS3/DCL4/AGO7 ta-siRNA pathway involved in leaf developmental timing. Required for the production of natural siRNAs (nat-siRNAs) derived from cis-natural antisense transcripts. Required for the production of 24 nucleotide nat-siRNAs derived from the stress-related P5CDH-SRO5 antisense gene pair. Required for PTGS induced by transgene direct repeats. Plays an essential role in transitive silencing of transgenes by processing secondary siRNAs. This pathway, which requires DCL2 and DCL4, amplifies silencing by using the target RNA as substrate to generate secondary siRNAs, providing an efficient mechanism for long-distance silencing. Involved in the biogenesis of secondary siRNAs which require 22 nucleotide miRNAs associated to AGO1. Participates synergistically with AS1 and AS2 to proper plant development by repressing the miR165 and miR166 microRNAs (independently of AGO10) that may lead to mRNA degradation of genes in the class III HD-ZIP family. Required for the production of some small RNAs derived from the crucifer-infecting tobamovirus (TMV-cg). Required for sense virus-induced post-transcriptional gene silencing (S-PTGS). |
RDR6_ARATH | similarity | Belongs to the RdRP family. |
RDR6_ARATH | subcellular location | Colocalize with SGS3 in cytoplasmic granules distinct from P-bodies. |
RDR6_ARATH | tissue specificity | Widely expressed. |
Function
Gene Ontology
cellular component | |
---|---|
cytoplasmic ribonucleoprotein granule | ECO |
nucleus | ECO |
molecular function | |
DNA-directed DNA polymerase activity | ECO |
RNA-dependent RNA polymerase activity | ECO |
RNA binding | ECO |
biological process | |
defense response to virus | ECO |
recognition of pollen | ECO |
RNAi-mediated antiviral immune response | ECO |
siRNA-mediated gene silencing by inhibition of translation | ECO |
gynoecium development | ECO |
leaf development | ECO |
maintenance of shoot apical meristem identity | ECO |
ta-siRNA processing | ECO |
regulatory ncRNA-mediated post-transcriptional gene silencing | ECO |
siRNA processing | ECO |
regulatory ncRNA-mediated gene silencing | ECO |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.