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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G46450:CDS:1 | 29 | Chr2: 19065845-19065873 | Arabidopsis thaliana |
AT2G46450:CDS:3 | 406 | Chr2: 19065943-19066348 | Arabidopsis thaliana |
AT2G46450:CDS:6 | 204 | Chr2: 19066428-19066631 | Arabidopsis thaliana |
AT2G46450:CDS:7 | 308 | Chr2: 19066704-19067011 | Arabidopsis thaliana |
AT2G46450:CDS:8 | 112 | Chr2: 19067113-19067224 | Arabidopsis thaliana |
AT2G46450:CDS:9 | 237 | Chr2: 19067303-19067539 | Arabidopsis thaliana |
AT2G46450:CDS:10 | 377 | Chr2: 19067623-19067999 | Arabidopsis thaliana |
AT2G46450:CDS:11 | 277 | Chr2: 19068088-19068364 | Arabidopsis thaliana |
AT2G46450:CDS:4 | 201 | Chr2: 19065953-19066153 | Arabidopsis thaliana |
AT2G46450:CDS:5 | 126 | Chr2: 19066223-19066348 | Arabidopsis thaliana |
AT2G46450:CDS:6.1 | 204 | Chr2: 19066428-19066631 | Arabidopsis thaliana |
AT2G46450:CDS:7.1 | 308 | Chr2: 19066704-19067011 | Arabidopsis thaliana |
AT2G46450:CDS:8.1 | 112 | Chr2: 19067113-19067224 | Arabidopsis thaliana |
AT2G46450:CDS:9.1 | 237 | Chr2: 19067303-19067539 | Arabidopsis thaliana |
AT2G46450:CDS:10.1 | 377 | Chr2: 19067623-19067999 | Arabidopsis thaliana |
AT2G46450:CDS:11.1 | 277 | Chr2: 19068088-19068364 | Arabidopsis thaliana |
AT2G46450:CDS:1.1 | 29 | Chr2: 19065845-19065873 | Arabidopsis thaliana |
AT2G46450:CDS:3.1 | 406 | Chr2: 19065943-19066348 | Arabidopsis thaliana |
AT2G46450:CDS:6.2 | 204 | Chr2: 19066428-19066631 | Arabidopsis thaliana |
AT2G46450:CDS:7.2 | 308 | Chr2: 19066704-19067011 | Arabidopsis thaliana |
AT2G46450:CDS:8.2 | 112 | Chr2: 19067113-19067224 | Arabidopsis thaliana |
AT2G46450:CDS:9.2 | 237 | Chr2: 19067303-19067539 | Arabidopsis thaliana |
AT2G46450:CDS:10.2 | 377 | Chr2: 19067623-19067999 | Arabidopsis thaliana |
AT2G46450:CDS:11.2 | 277 | Chr2: 19068088-19068364 | Arabidopsis thaliana |
AT2G46450:CDS:1.2 | 29 | Chr2: 19065845-19065873 | Arabidopsis thaliana |
AT2G46450:CDS:2 | 211 | Chr2: 19065943-19066153 | Arabidopsis thaliana |
AT2G46450:CDS:5.1 | 126 | Chr2: 19066223-19066348 | Arabidopsis thaliana |
AT2G46450:CDS:6.3 | 204 | Chr2: 19066428-19066631 | Arabidopsis thaliana |
AT2G46450:CDS:7.3 | 308 | Chr2: 19066704-19067011 | Arabidopsis thaliana |
AT2G46450:CDS:8.3 | 112 | Chr2: 19067113-19067224 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G46450:exon:1 | 338 | Chr2: 19065536-19065873 | Arabidopsis thaliana |
AT2G46450:exon:14 | 759 | Chr2: 19068088-19068846 | Arabidopsis thaliana |
AT2G46450:exon:16 | 638 | Chr2: 19068932-19069569 | Arabidopsis thaliana |
AT2G46450:exon:6 | 206 | Chr2: 19065948-19066153 | Arabidopsis thaliana |
AT2G46450:exon:2 | 228 | Chr2: 19065646-19065873 | Arabidopsis thaliana |
AT2G46450:exon:5 | 406 | Chr2: 19065943-19066348 | Arabidopsis thaliana |
AT2G46450:exon:15 | 814 | Chr2: 19068088-19068901 | Arabidopsis thaliana |
AT2G46450:exon:3 | 158 | Chr2: 19065716-19065873 | Arabidopsis thaliana |
AT2G46450:exon:4 | 211 | Chr2: 19065943-19066153 | Arabidopsis thaliana |
AT2G46450:exon:7 | 126 | Chr2: 19066223-19066348 | Arabidopsis thaliana |
AT2G46450:exon:8 | 204 | Chr2: 19066428-19066631 | Arabidopsis thaliana |
AT2G46450:exon:9 | 308 | Chr2: 19066704-19067011 | Arabidopsis thaliana |
AT2G46450:exon:10 | 112 | Chr2: 19067113-19067224 | Arabidopsis thaliana |
AT2G46450:exon:11 | 237 | Chr2: 19067303-19067539 | Arabidopsis thaliana |
AT2G46450:exon:12 | 377 | Chr2: 19067623-19067999 | Arabidopsis thaliana |
AT2G46450:exon:13 | 397 | Chr2: 19068088-19068484 | Arabidopsis thaliana |
AT2G46455:exon:13 | 137 | Chr2: 19069385-19069521 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G46450:five_prime_UTR:1 | 309 | Chr2: 19065536-19065844 | Arabidopsis thaliana |
AT2G46450:five_prime_UTR:3 | 228 | Chr2: 19065646-19065873 | Arabidopsis thaliana |
AT2G46450:five_prime_UTR:5 | 5 | Chr2: 19065948-19065952 | Arabidopsis thaliana |
AT2G46450:five_prime_UTR:2 | 199 | Chr2: 19065646-19065844 | Arabidopsis thaliana |
AT2G46450:five_prime_UTR:4 | 129 | Chr2: 19065716-19065844 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G46455 | locus:504956087 | AT2G46455 | 1699 | Chr2: 19069385-19071083 | A. thaliana | OxaA/YidC-like membrane insertion protein;(source:Araport11) | NULL | OxaA/YidC-like membrane insertion protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G46450.1 | 3379 | Chr2: 19065536-19069569 |
AT2G46450.3 | 2195 | Chr2: 19065646-19068484 |
AT2G46450.4 | 2686 | Chr2: 19065646-19068901 |
AT2G46450.2 | 2130 | Chr2: 19065716-19068484 |
AT2G46455.2 | 1048 | Chr2: 19069385-19071011 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G46450:three_prime_UTR:2 | 482 | Chr2: 19068365-19068846 | Arabidopsis thaliana |
AT2G46450:three_prime_UTR:4 | 638 | Chr2: 19068932-19069569 | Arabidopsis thaliana |
AT2G46450:three_prime_UTR:3 | 537 | Chr2: 19068365-19068901 | Arabidopsis thaliana |
AT2G46450:three_prime_UTR:1 | 120 | Chr2: 19068365-19068484 | Arabidopsis thaliana |
AT2G46455:three_prime_UTR:7 | 137 | Chr2: 19069385-19069521 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
CNG12_ARATH-2 CNG12_ARATH | function | Probable cyclic nucleotide-gated ion channel. |
CNG12_ARATH-2 CNG12_ARATH F4II92_ARATH F4II93_ARATH | similarity | Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family. |
Function
Gene Ontology
cellular component | |
---|---|
plasma membrane | ECO |
molecular function | |
calmodulin binding | ECO |
cAMP binding | ECO |
monoatomic cation channel activity | ECO |
cGMP binding | ECO |
biological process | |
response to fungus | ECO |
defense response | ECO |
response to bacterium | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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