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Gene : RPT2 A. thaliana

DB identifier  ? AT2G30520 Secondary Identifier  ? locus:2064357
Name  ? ROOT PHOTOTROPISM 2 Brief Description  Phototropic-responsive NPH3 family protein
TAIR Computational Description  Phototropic-responsive NPH3 family protein;(source:Araport11)
TAIR Curator Summary  Encodes a phototropin-interacting NRL protein that is an early signaling component in the phototrophic response and is essential for the phototropin-mediated chloroplast accumulation response but is not involved in the chloroplast avoidance response or stomatal opening.
TAIR Short Description  Phototropic-responsive NPH3 family protein
TAIR Aliases  RPT2

9 Gene Rifs

1 Organism

29 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3061  
Location: Chr2:13002686-13005746 reverse strand

Gene models - RPT2 AT2G30520

? Gene models

Transcripts: 3  Exons: 10  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RPT2_ARATH function May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Signal transducer of the phototropic response and photo-induced movements. Necessary for root phototropism. Involved in hypocotyl phototropism under high rate but not under low rate light. Regulates stomata opening. Seems to be not involved in chloroplast accumulation and translocation.
F4INU4_ARATH RPT2_ARATH pathway Protein modification; protein ubiquitination.
F4INU4_ARATH RPT2_ARATH similarity Belongs to the NPH3 family.
RPT2_ARATH tissue specificity Expressed in hypocotyls, guard cells and mesophyll cells.

2 Proteins

Function

Gene Ontology

cellular component
peroxisome  ? ECO  
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
No terms in this category.
biological process
protein ubiquitination  ? ECO  
chloroplast accumulation movement  ? ECO  
phototropism  ? ECO  
signal transduction  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


32 Homologues

 

Other

9 Data Sets