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Gene : chr31 A. thaliana

DB identifier  ? AT1G05490 Secondary Identifier  ? locus:2201006
Name  ? chromatin remodeling 31 Brief Description  chromatin remodeling 31
TAIR Computational Description  chromatin remodeling 31;(source:Araport11)
TAIR Curator Summary  Involved in gene silencing. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY1-4 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs.
TAIR Short Description  chromatin remodeling 31
TAIR Aliases  chr31, CLSY3

0 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4986  
Location: Chr1:1618504-1623489 reverse strand

Gene models - chr31 AT1G05490

? Gene models

Transcripts: 1  Exons: 4  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CLSY3_ARATH function Probable chromatin remodeling factor.
CLSY3_ARATH similarity Belongs to the SNF2/RAD54 helicase family.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
ATP binding  ? ECO  
ATP-dependent chromatin remodeler activity  ? ECO  
DNA binding  ? ECO  
helicase activity  ? ECO  
hydrolase activity  ? ECO  
biological process
positive regulation of post-transcriptional gene silencing by RNA  ? ECO  
gene silencing by siRNA-directed DNA methylation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets