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Search results 801 to 815 out of 815 for Genome-wide association study

Category restricted to Generif (x)

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Category: Generif
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Type Details Score
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study identified a nitrogen-responsive signaling module that comprises both xyloglucan endotransglucosylase 9 (XTH9) and the Dof transcription factor OBP4 and controls lateral root (LR) development in Arabidopsis. OBP4 bound to the promoter of XTH9 to suppress XTH9 expression to antagonistically control XTH9 expression. OBP4-XTH9 module elaborately sustains LR development in response to nitrate treatment.
Organism: A. thaliana
Gene: XTH9
PubMed Id: 31626627
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study compared the functions of the wild-type TRY and ETC2 proteins and their amino acid-substituted versions. Results showed that the substitution of amino acids in the C-terminal of TRY and ETC2 conferred them the ability to induce root hair formation. Furthermore, results confirmed that these mutations enhanced the stability of the TRY and ETC2 proteins.
Organism: A. thaliana
Gene: TRY
PubMed Id: 30308079
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study identified a nitrogen-responsive signaling module that comprises both xyloglucan endotransglucosylase 9 (XTH9) and the Dof transcription factor OBP4 and controls lateral root (LR) development in Arabidopsis. OBP4 bound to the promoter of XTH9 to suppress XTH9 expression to antagonistically control XTH9 expression. OBP4-XTH9 module elaborately sustains LR development in response to nitrate treatment.
Organism: A. thaliana
Gene: OBP4
PubMed Id: 31626627
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The ACC oxidase gene is suggested to play a major role in ethylene production that leads to flood tolerance. This study revealed that ACC oxidase overexpression could possibly compensate for the loss in enzyme activity caused by hypoxia during flooding conditions, by promoting the increase in stem width and formation of expanded aerenchymatic tissues.
Organism: A. thaliana
Gene: ACO2
PubMed Id: 29894687
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study discovered SOBIR1/EVR as a regulator of secondary growth. SOBIR1/EVR acts through a mechanism that involves BREVIPEDICELLUS (BP) and ERECTA (ER). SOBIR1/EVR physically interacts with ER and that defects caused by the sobir1/evr mutation are aggravated by mutating ER, indicating that SOBIR1/EVR and ERECTA act together in the control of the precocious formation of xylem fiber development.
Organism: A. thaliana
Gene: ER
PubMed Id: 31444299
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study discovered SOBIR1/EVR as a regulator of secondary growth. SOBIR1/EVR acts through a mechanism that involves BREVIPEDICELLUS (BP) and ERECTA (ER). SOBIR1/EVR physically interacts with ER and that defects caused by the sobir1/evr mutation are aggravated by mutating ER, indicating that SOBIR1/EVR and ERECTA act together in the control of the precocious formation of xylem fiber development.
Organism: A. thaliana
Gene: SOBIR1
PubMed Id: 31444299
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study shows a regulatory role of Arabidopsis Rca phosphorylation at the Thr78 site. Conservative substitution of serine for threonine-78 (T78S) results in impaired functionality of Rca in vivo. Plants expressing the T78S mutation had reduced photosynthesis and quantum efficiency of photosystem II and reduced growth relative to control plants expressing wild-type Rca-beta under all conditions tested.
Organism: A. thaliana
Gene: RCA
PubMed Id: 31451644
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: RST1 and RST1 INTERACTING PROTEIN (RIPR) connect the cytosolic Arabidopsis RNA exosome to the Ski complex. rst1 and ripr mutants accumulate RNA quality control siRNAs produced by the post-transcriptional gene silencing machinery when mRNA degradation is compromised. Study biochemical and genetic data establish RST1 and RIPR as cofactors of the cytoplasmic exosome and the Ski complex in plants.
Organism: A. thaliana
Gene: RST1
PubMed Id: 31455787
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: This study shows that the flexible regions of protein D1 that protrude into the lumen can penetrate through the three side-openings of Deg1 and reach its internal proteolytic sites. This mode of action, facilitating cooperation between proteases on both sides of the thylakoid membranes, should be applicable to the degradation of other integral thylakoid membrane proteins as well.
Organism: A. thaliana
Gene: DEG1
PubMed Id: 29588501
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study demonstrated that majority of the effects on Arabidopsis root development previously attributed to strigolactones signaling are actually mediated by the KAI2 signaling pathway and all effects of KAI2 in the root can be explained by canonical SMAX1/SMXL2 activity. Results demonstrated that the KAI2 signaling pathway is an important new regulator of root hair and root development in Arabidopsis.
Organism: A. thaliana
Gene: KAI2
PubMed Id: 31465451
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: RST1 and RST1 INTERACTING PROTEIN (RIPR) connect the cytosolic Arabidopsis RNA exosome to the Ski complex. rst1 and ripr mutants accumulate RNA quality control siRNAs produced by the post-transcriptional gene silencing machinery when mRNA degradation is compromised. Study biochemical and genetic data establish RST1 and RIPR as cofactors of the cytoplasmic exosome and the Ski complex in plants.
Organism: A. thaliana
Gene: AT5G44150
PubMed Id: 31455787
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study concludes that NRT1.1 also acts as a high-affinity transport systems in low-nitrate growth medium, in addition to its low-affinity nitrate transporter function under sufficient-nitrate conditions. Although the contribution made by NRT1.1 to high affinity nitrate uptake may be relatively small compared with that of the other transporters, it is necessary for maintaining growth under low-nitrate growth conditions.
Organism: A. thaliana
Gene: NRT1.1
PubMed Id: 31172512
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study determine the structure of RCD1-RST domain, a unique folded hub illuminating details of its interactions with disordered partners of its stress-associated interactome. Similar structures are identified in the PAH, TAFH, and NCBD domains. These alphaalpha hubs, as they share an aa-hairpin super-secondary motif, which serves as an organizing platform for malleable helices of varying topology.
Organism: A. thaliana
Gene: RCD1
PubMed Id: 29657132
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study showed that SINAL7 over-expression had a positive effect on vegetative growth in Arabidopsis, resulting in sucrose and hexose levels increase and leading to a higher biomass content associated with stomatal closure and drought tolerance. The SINAL7-over-expressing plants showed a delay in senescence, with no signs of aging at the transcriptional level and in terms of chlorophyll content or leaf yellowing.
Organism: A. thaliana
Gene: AT5G37890
PubMed Id: 30003973
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Study reveals that MET18 mutation caused DNA hypermethylation at more than 1000 loci, of which about 70% were overlapped with the ROS1 targeted loci, indicating a same genetic pathway. Results show that MET18 regulates active DNA demethylation by affecting the enzymatic activity of the ROS1/DME family proteins. Thus, MET18 can regulate both active DNA demethylation and DNA methylation pathways in Arabidopsis.
Organism: A. thaliana
Gene: MET18
PubMed Id: 27193999
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