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Gene : NAC052 A. thaliana

DB identifier  ? AT3G10490 Secondary Identifier  ? locus:2075835
Name  ? NAC domain containing protein 52 Brief Description  NAC domain containing protein 52
TAIR Computational Description  NAC domain containing protein 52;(source:Araport11)
TAIR Curator Summary  Encodes a NAC transcription factor that physically associates with the histone H3K4 demethylase JMJ14 and through that association is involved in transcriptional repression and flowering time control.
TAIR Short Description  NAC domain containing protein 52
TAIR Aliases  ANAC051, ANAC052, NAC052, SGS1

0 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3378  
Location: Chr3:3267825-3271202

Gene models - NAC052 AT3G10490

? Gene models

Transcripts: 4  Exons: 17  Introns: 13 

Overlapping Features

? Genome features that overlap coordinates of this Gene

14 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
NAC52_ARATH NAC52_ARATH-2 function Transcriptional repressor that binds to the motif 5'-(C/T)A(C/A)G-3' in the promoter of target genes (PubMed:25578968). Binds also to the 5'-CTTGNNNNNCAAG-3' consensus sequence in chromatin (PubMed:26617990). Can bind to the mitochondrial dysfunction motif (MDM) present in the upstream regions of mitochondrial dysfunction stimulon (MDS) genes involved in mitochondrial retrograde regulation (MRR) (PubMed:24045019). Together with NAC050 and JMJ14, regulates gene expression and flowering time by associating with the histone demethylase JMJ14, probably by the promotion of RNA-mediated gene silencing (PubMed:25578968, PubMed:26617990). Regulates siRNA-dependent post-transcriptional gene silencing (PTGS) through SGS3 expression modulation (PubMed:28207953). Required during pollen development (PubMed:19237690).
NAC52_ARATH NAC52_ARATH-2 tissue specificity Mostly expressed in floral organs, and, at low levels, in other organs.

3 Proteins

Function

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
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Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

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7 Data Sets