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Gene : AT1G55750 A. thaliana

DB identifier  ? AT1G55750 Secondary Identifier  ? locus:2020447
Brief Description  BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)
TAIR Computational Description  BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins);(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5809  
Location: Chr1:20840091-20845899 reverse strand

Gene models - AT1G55750 AT1G55750

? Gene models

Transcripts: 6  Exons: 117  Introns: 111 

Overlapping Features Displayer

31 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TFB1A_ARATH function Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape. Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module CAK controls the initiation of transcription.
TFB1A_ARATH A0A1P8AST3_ARATH A0A1P8ASX6_ARATH similarity Belongs to the TFB1 family.

3 Proteins

Function

Gene Ontology

cellular component
transcription factor TFIIH core complex  ? ECO  
molecular function
No terms in this category.
biological process
nucleotide-excision repair  ? ECO  
DNA-templated transcription  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
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Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets