BAR News & Other Announcements

Follow us on Facebook to receive occassional updates about the BAR: facebook.com/BioAnalyticResource

Funding News

We are pleased to announce that the Faculty of Arts and Science has funded an RA position to help coordinate research project internships at the BAR and for the new Araport ThaleMine instance that the BAR will roll out soon!

eFP Wheat

Try our new Wheat eFP Browser, published together an extensive analysis of gene expression of homeologous genes in wheat with Cristobal Uauy and colleagues in Science Magazine!

ePlant

ePlant helps biologists visualize the natural connections between DNA sequences, natural variation (polymorphisms), molecular structures, protein-protein interactions, and gene expression patterns by combining several data visualization tools with a zoomable user interface Waese et al. 2017.

Thank you!

Thanks for liking us more than 1000 times on Facebook. If you haven't clicked that button yet, like us to keep up-to-date with the latest BAR and plant bioinformatics news. It might help us get funding down the road too!

Gene Expression and Protein Tools

View expression patterns as electronic fluorescent pictographs or heatmaps, explore promoters, identify protein-protein interactions and more.

ePlants

ePlant
(new version)
Go! Pub
ePlant Maize
Go!
ePlant Poplar
Go!
ePlant Tomato
Go!
ePlant Camelina
Go!
ePlant Soybean
Go!
ePlant Potato
Go!
ePlant Barley
Go!
ePlant Medicago
Go!
ePlant Eucalyptus
Go!
ePlant Rice
Go!
ePlant Willow
Go!
ePlant Sunflower
Go!
ePlant Cannabis
Go!
ePlant Wheat
Go!
ePlant Sugarcane
Go!
Legacy ePlant
(PLOS ONE version)
Go! Pub

Arabidopsis eFP Browsers

Arabidopsis eFP Browser
Go! Pub
Cell eFP Browser
Go!
Arabidopsis Seed Coat eFP Browser
Go! Pub
Arabidopsis Translatome eFP Browser
Go!
Arabidopsis Spatio-Temporal Root Stress eFP Browser
Go!

Expression Anglers and other Expression Browsers

Expression Angler 2016
Go! Pub
Legacy Expression Angler
Go! Pub
Poplar Expression Angler
Go!
Sample Angler
Go!
e-Northerns w. Expression Browser
Go! Pub
Poplar Expression Browser
Go!

Other Dicot eFP Browsers

Poplar eFP Browser
Go! Pub Pub
Medicago eFP Browser
Go!
Soybean eFP Browser
Go!
Potato eFP Browser
Go!
Tomato eFP Browser
Go!
E. salsugineum eFP Browser
Go! Pub
C. sativa eFP Browser
Go! Pub
Arachis eFP Browser
Go! Pub
Grape eFP Browser
Go! Pub
Cannabis eFP Browser
Go!
Kalanchoe eFP Browser
Go! Pub

Monocot eFP Browsers

Maize eFP Browser
Go! Pub Pub
Rice eFP Browser
Go!
Barley eFP Browser
Go!
Triticale eFP Browser
Go! Pub
Brachypodium eFP Browser
Go! Pub
Wheat eFP Browser
Go! Pub

Other Gene Expression & Protein Tools

ThaleMine
Go! Pub
eFP-Seq Browser
Go! Pub
Expressolog Tree Viewer
Go! Pub
Promomer
Go! Pub
Cistome
Go! Pub
Arabidopsis Interactions Viewer
Go! Pub
Arabidopsis Interactions Viewer 2.0
Go! Pub
Rice Interactions Viewer
Go! Pub
Gene Slider
Go! Pub
Physcomitrella eFP Browser
Go!
Selaginella eFP Browser
Go! Pub
Mouse eFP Browser
Go!
Human eFP Browser
Go!

Molecular Markers and Mapping Tools

Perform Next Generation Mapping, or generate your own markers using our molecular marker tools.

Next Generation Mapping
Go! Pub
Marker Tracker
Go!
Blast Digester
Go! Pub
CapsID
Go! Pub

Other Genomic Tools and Widgets

Remove duplicates, perform multi-dimensional Venn analyses, or generate random lists of identifiers.

Arabidopsis Citation Network Viewer
Go!
ClustalW with MView Output
Go!
DataMetaFormatter
Go!
Heatmapper
Go!
Heatmapper Plus
Go!
Duplicate Remover
Go!
Venn Selector
Go!
Venn SuperSelector
Go!
Random ID list generator
Go!
AGURR
Go!
Classification Super Viewer
Go! Pub
Medicago Classification Super Viewer
Go! Pub
_at to AGI converter
Go!
MASTA
Go!
GeneMANIA
Go!
Topo-phylogeny
Go! Pub

Top