v5.1.0-20221003
Data mining on Arabidopsis thaliana
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Enter a keyword to search for associated GO terms and genes (e.g. flowering)
Extract protein sequences for one or more genes in FASTA format. The input search term can be a gene ID (e.g. At3G24650), or Gene Symbol (e.g. ABI3). The search also supports wildcard character represented by an asterisk (e.g. ABI*).
Extract coding sequences (CDS) for one or more genes in FASTA format. The input search term can be a gene ID (e.g. At3G24650), or Gene Symbol (e.g. ABI3). The search also support wildcard character represented by an asterisk (e.g. ABI*).
For a gene of interest, show all known Interactions (Data Source: BioGRID and IntAct Interactions data sets).
Enter a gene or a list of genes to retrieve the ontology terms
Show the paralog or ortholog for a given Arabidopsis gene(s). (Data source: Panther)
retrieves the GeneRif annotation connected to the gene and the relevant publications.
List all the transposable elements in Araport11.
Retrieve the DNA sequences in the upstream/downstream flanking region for given gene (s)
Use either the InterPro identifier (e.g. IPR003441) or the short name (e.g. NAC-dom). The search is case insensitive and you can use * for approximate searches.
Retrieves publications directly associated with the gene. Note: ThaleMine report page for the gene also lists the publications related to the proteins products of the gene and to its GeneRIF annotation.