v5.1.0-20241202
Data mining on Arabidopsis thaliana
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Enter a keyword to search for associated GO terms and genes (e.g. flowering)
Extract protein sequences for one or more genes in FASTA format. The input search term can be a gene ID (e.g. At3G24650), or Gene Symbol (e.g. ABI3). The search also supports wildcard character represented by an asterisk (e.g. ABI*).
Extract coding sequences (CDS) for one or more genes in FASTA format. The input search term can be a gene ID (e.g. At3G24650), or Gene Symbol (e.g. ABI3). The search also support wildcard character represented by an asterisk (e.g. ABI*).
For a gene of interest, show all known Interactions (Data Source: BioGRID and IntAct Interactions data sets).
Show the paralog or ortholog for a given Arabidopsis gene(s). (Data source: Panther)
Enter a gene or a list of genes to retrieve the ontology terms
retrieves the GeneRif annotation connected to the gene and the relevant publications.
List all the transposable elements in Araport11.
Retrieve the DNA sequences in the upstream/downstream flanking region for given gene (s)
Use either the InterPro identifier (e.g. IPR003441) or the short name (e.g. NAC-dom). The search is case insensitive and you can use * for approximate searches.
Retrieves publications directly associated with the gene. Note: ThaleMine report page for the gene also lists the publications related to the proteins products of the gene and to its GeneRIF annotation.