Genomics
Gene models -
Gene models
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Overlapping Features
Genome features that overlap coordinates of this FivePrimeUTR
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G63440:exon:1 | 223 | Chr5: 25406252-25406474 | Arabidopsis thaliana |
AT5G63440:exon:2 | 173 | Chr5: 25406302-25406474 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G63440:five_prime_UTR:1 | 108 | Chr5: 25406252-25406359 | Arabidopsis thaliana |
AT5G63440:five_prime_UTR:3 | 107 | Chr5: 25406302-25406408 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G63440 | locus:2167361 | AT5G63440 | 2205 | Chr5: 25406252-25408456 | A. thaliana | hypothetical protein (DUF167);(source:Araport11) | Encodes a single copy protein in Arabidopsis containing a DUF167 domain that is conserved in eukaryotes. Genetically CSU suppresses mutations in COP1. In vitro, it interacts with CACTIN and in vivo with CCA1. CSU4 promotes photomorphogenesis via negative regulation of CCA1 and PIF4 expression. | Protein of unknown function (DUF167) | CSU4 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G63440.2 | 1068 | Chr5: 25406252-25408456 |
AT5G63440.3 | 974 | Chr5: 25406302-25408420 |
AT5G63440.1 | 1113 | Chr5: 25406302-25408423 |