Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposonFragment
Exon: 1, Intergenic Region: 1, mRNA: 1, Transposable Element: 1, Transposable Element Gene: 1, Transposon Fragment: 1
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G27885:exon:1 | 4639 | Chr5: 9892138-9896776 | Arabidopsis thaliana |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr5_9889952..9892137 | 2186 | Chr5: 9889952-9892137 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE36040 | 7936 | Chr5: 9890101-9898036 | Arabidopsis thaliana |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G27885 | locus:504955196 | AT5G27885 | 4639 | Chr5: 9892138-9896776 | A. thaliana | transposable_element_gene;(source:Araport11);gypsy-like retrotransposon family, has a 9.4e-260 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica);(source:TAIR10) | NULL | transposable element gene |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE36040:transposon_fragment:2 | 484 | Chr5: 9896269-9896752 | Arabidopsis thaliana |