Genomics
Genome feature
| Region: |
antisense_lncRNA
|
Length: |
365
 |
| Location: | Chr4:6269645-6270101 reverse strand | ||
Gene models -
Gene models
No results
Overlapping Features
Genome features that overlap coordinates of this AntisenseLncRNA
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT4G10020:CDS:5 |
165
|
Chr4: 6269536-6269700 | Arabidopsis thaliana |
| AT4G10020:CDS:6 |
405
|
Chr4: 6269775-6270179 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT4G10020:exon:5 |
165
|
Chr4: 6269536-6269700 | Arabidopsis thaliana |
| AT4G10020:exon:6 |
660
|
Chr4: 6269775-6270434 | Arabidopsis thaliana |
| AT4G05755:exon:4 |
593
|
Chr4: 6269079-6269671 | Arabidopsis thaliana |
| AT4G05755:exon:1 |
418
|
Chr4: 6269779-6270196 | Arabidopsis thaliana |
| AT4G05755:exon:3 |
27
|
Chr4: 6269645-6269671 | Arabidopsis thaliana |
| AT4G05755:exon:2 |
338
|
Chr4: 6269764-6270101 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT4G10020 | locus:2140553 | HSD5 | hydroxysteroid dehydrogenase 5 |
2162
|
Chr4: 6268273-6270434 | A. thaliana | hydroxysteroid dehydrogenase 5;(source:Araport11) | Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5. | hydroxysteroid dehydrogenase 5 | AtHSD5, HSD5 |
| AT4G05755 | AT4G05755 |
1118
|
Chr4: 6269079-6270196 | A. thaliana | Natural antisense transcript overlaps with AT4G10020;(source:Araport11) | NULL |
