Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposonFragment
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G08820:exon:1 | 192 | Chr4: 5621764-5621955 | Arabidopsis thaliana |
AT4G08820:exon:2 | 361 | Chr4: 5622055-5622415 | Arabidopsis thaliana |
AT4G08820:exon:3 | 662 | Chr4: 5622548-5623209 | Arabidopsis thaliana |
AT4G08830:exon:1 | 3458 | Chr4: 5623753-5627210 | Arabidopsis thaliana |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr4_5623210..5623752 | 543 | Chr4: 5623210-5623752 | Arabidopsis thaliana |
intergenic_region_chrChr4_5627211..5631297 | 4087 | Chr4: 5627211-5631297 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G08820.1 | 1215 | Chr4: 5621764-5623209 |
AT4G08830.1 | 3458 | Chr4: 5623753-5627210 |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4TE23575 | 5671 | Chr4: 5621794-5627464 | Arabidopsis thaliana |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G08820 | locus:2138238 | AT4G08820 | 1446 | Chr4: 5621764-5623209 | A. thaliana | transposable_element_gene;(source:Araport11);similar to nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G01050.1);(source:TAIR10) | NULL | transposable element gene | ||
AT4G08830 | locus:2138248 | AT4G08830 | 3458 | Chr4: 5623753-5627210 | A. thaliana | transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 4.0e-49 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus);(source:TAIR10) | NULL | transposable element gene |