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Gene : PUB25 A. thaliana

DB identifier  ? AT3G19380 Secondary Identifier  ? locus:2090604
Name  ? plant U-box 25 Brief Description  plant U-box 25
TAIR Computational Description  plant U-box 25;(source:Araport11)
TAIR Curator Summary  PUB25 and PUB26 are closely related paralogs that encode functional E3 ligases. They function in immune response pathway by targeting BIK1 for degradation.
TAIR Short Description  plant U-box 25
TAIR Aliases  PUB25

2 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2046  
Location: Chr3:6714133-6716178 reverse strand

Gene models - PUB25 AT3G19380

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PUB25_ARATH function Functions as an E3 ubiquitin ligase.
PUB25_ARATH pathway Protein modification; protein ubiquitination.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
ubiquitin protein ligase activity  ? ECO  
biological process
defense response to other organism  ? ECO  
protein ubiquitination  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets