Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposableElement
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G16680:exon:1 | 3992 | Chr2: 7232292-7236283 | Arabidopsis thaliana |
AT2G16690:exon:1 | 723 | Chr2: 7236878-7237600 | Arabidopsis thaliana |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr2_7236284..7236877 | 594 | Chr2: 7236284-7236877 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G16680.1 | 3992 | Chr2: 7232292-7236283 |
AT2G16690.1 | 723 | Chr2: 7236878-7237600 |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G16680 | locus:2059840 | AT2G16680 | 3992 | Chr2: 7232292-7236283 | A. thaliana | transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 5.0e-35 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus);(source:TAIR10) | NULL | transposable element gene | ||
AT2G16690 | locus:2059846 | AT2G16690 | 723 | Chr2: 7236878-7237600 | A. thaliana | transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41570.1);(source:TAIR10) | NULL | transposable element gene |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE29460:transposon_fragment:2 | 4116 | Chr2: 7232311-7236426 | Arabidopsis thaliana |
AT2TE29460:transposon_fragment:1 | 591 | Chr2: 7236923-7237513 | Arabidopsis thaliana |