Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposonFragment
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G07420:exon:1 | 4365 | Chr2: 3084468-3088832 | Arabidopsis thaliana |
AT2G07430:exon:1 | 1264 | Chr2: 3089468-3090731 | Arabidopsis thaliana |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr2_3083903..3084467 | 565 | Chr2: 3083903-3084467 | Arabidopsis thaliana |
intergenic_region_chrChr2_3088833..3089467 | 635 | Chr2: 3088833-3089467 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G07420.1 | 4365 | Chr2: 3084468-3088832 |
AT2G07430.1 | 1264 | Chr2: 3089468-3090731 |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE13385 | 5565 | Chr2: 3083904-3089468 | Arabidopsis thaliana |
Transposable Element Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G07420 | locus:2054850 | AT2G07420 | 4365 | Chr2: 3084468-3088832 | A. thaliana | transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 2.1e-170 P-value blast match to GB:BAA78424 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996363|dbj|BAA78424.1| polyprotein (AtRE2) (Arabidopsis thaliana) (Ty1_Copia-element);(source:TAIR10) | NULL | transposable element gene | ||
AT2G07430 | locus:2054880 | AT2G07430 | 1264 | Chr2: 3089468-3090731 | A. thaliana | transposable_element_gene;(source:Araport11);gypsy-like retrotransposon family (Athila), has a 4.0e-125 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana);(source:TAIR10) | NULL | transposable element gene |