Genomics
Overlapping Features
Genome features that overlap coordinates of this TransposableElement
CDSs: 4, Exons: 4, Five Prime UTRs: 3, Genes: 2, Intergenic Region: 1, mRNAs: 3, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G03320:CDS:1 | 40 | Chr2: 1007567-1007606 | Arabidopsis thaliana |
AT2G03320:CDS:3 | 242 | Chr2: 1007704-1007945 | Arabidopsis thaliana |
AT2G03320:CDS:2 | 7 | Chr2: 1007586-1007592 | Arabidopsis thaliana |
AT2G03320:CDS:3.1 | 242 | Chr2: 1007704-1007945 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G03310:exon:1 | 541 | Chr2: 1006646-1007186 | Arabidopsis thaliana |
AT2G03320:exon:1 | 65 | Chr2: 1007542-1007606 | Arabidopsis thaliana |
AT2G03320:exon:2 | 38 | Chr2: 1007555-1007592 | Arabidopsis thaliana |
AT2G03320:exon:3 | 242 | Chr2: 1007704-1007945 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G03310:five_prime_UTR:1 | 97 | Chr2: 1007090-1007186 | Arabidopsis thaliana |
AT2G03320:five_prime_UTR:1 | 25 | Chr2: 1007542-1007566 | Arabidopsis thaliana |
AT2G03320:five_prime_UTR:2 | 31 | Chr2: 1007555-1007585 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G03310 | locus:2056906 | AT2G03310 | 931 | Chr2: 1006256-1007186 | A. thaliana | transmembrane protein;(source:Araport11) | NULL | NULL | ||
AT2G03320 | locus:2056871 | AT2G03320 | 404 | Chr2: 1007542-1007945 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL |
Intergenic Regions
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
intergenic_region_chrChr2_1007187..1007541 | 355 | Chr2: 1007187-1007541 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G03310.1 | 848 | Chr2: 1006256-1007186 |
AT2G03320.1 | 307 | Chr2: 1007542-1007945 |
AT2G03320.2 | 280 | Chr2: 1007555-1007945 |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE04505:transposon_fragment:1 | 597 | Chr2: 1007126-1007722 | Arabidopsis thaliana |