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Gene : LSF1 A. thaliana

DB identifier  ? AT3G01510 Secondary Identifier  ? locus:2084133
Name  ? like SEX4 1 Brief Description  like SEX4 1
TAIR Computational Description  like SEX4 1;(source:Araport11)
TAIR Curator Summary  Encodes a putative phosphatase, LSF1, required for normal starch turnover in leaves.
TAIR Short Description  like SEX4 1
TAIR Aliases  LSF1

2 Gene Rifs

Trail: Gene

1 Organism

Trail: Gene

15 Publications

Trail: Gene

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3489  
Location: Chr3:198322-201810 reverse strand

Gene models - LSF1 AT3G01510

? Gene models

Transcripts: 3  Exons: 29  Introns: 26 

Overlapping Features

? Genome features that overlap coordinates of this Gene

18 Child Features

Trail: Gene

1 Cross References

Trail: Gene

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Trail: Gene

Proteins

Curated comments from UniProt

Type Comment Proteins
LSF1_ARATH function Starch granule-associated phosphoglucan phosphatase involved in the control of starch accumulation. Participates in the regulation of the initial steps of starch degradation at the granule surface. May release a different set of phosphate groups from those removed by DSP4.
LSF1_ARATH subcellular location Located on the surface of starch granules.

2 Proteins

Trail: Gene

Function

Gene Ontology

cellular component
chloroplast stroma  ? ECO  
chloroplast  ? ECO  
starch grain  ? ECO  
chloroplast starch grain  ? ECO  
molecular function
carbohydrate phosphatase activity  ? ECO  
phosphoprotein phosphatase activity  ? ECO  
biological process
starch catabolic process  ? ECO  
protein dephosphorylation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
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Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets

Trail: Gene