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Genomics
Genome feature
| Region: |
gene
|
Length: |
2208
 |
| Location: | Chr5:15573505-15575712 reverse strand | ||
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G38900:CDS:9 |
78
|
Chr5: 15573745-15573822 | Arabidopsis thaliana |
| AT5G38900:CDS:8 |
57
|
Chr5: 15573938-15573994 | Arabidopsis thaliana |
| AT5G38900:CDS:7 |
85
|
Chr5: 15574079-15574163 | Arabidopsis thaliana |
| AT5G38900:CDS:6 |
126
|
Chr5: 15574262-15574387 | Arabidopsis thaliana |
| AT5G38900:CDS:5 |
44
|
Chr5: 15574471-15574514 | Arabidopsis thaliana |
| AT5G38900:CDS:4 |
120
|
Chr5: 15574601-15574720 | Arabidopsis thaliana |
| AT5G38900:CDS:3 |
144
|
Chr5: 15574802-15574945 | Arabidopsis thaliana |
| AT5G38900:CDS:9.1 |
78
|
Chr5: 15573745-15573822 | Arabidopsis thaliana |
| AT5G38900:CDS:8.1 |
57
|
Chr5: 15573938-15573994 | Arabidopsis thaliana |
| AT5G38900:CDS:7.1 |
85
|
Chr5: 15574079-15574163 | Arabidopsis thaliana |
| AT5G38900:CDS:6.1 |
126
|
Chr5: 15574262-15574387 | Arabidopsis thaliana |
| AT5G38900:CDS:5.1 |
44
|
Chr5: 15574471-15574514 | Arabidopsis thaliana |
| AT5G38900:CDS:4.1 |
120
|
Chr5: 15574601-15574720 | Arabidopsis thaliana |
| AT5G38900:CDS:2 |
155
|
Chr5: 15574802-15574956 | Arabidopsis thaliana |
| AT5G38900:CDS:1 |
46
|
Chr5: 15575233-15575278 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G38895:exon:12 |
244
|
Chr5: 15573283-15573526 | Arabidopsis thaliana |
| AT5G38900:exon:10 |
318
|
Chr5: 15573505-15573822 | Arabidopsis thaliana |
| AT5G38900:exon:1 |
167
|
Chr5: 15575546-15575712 | Arabidopsis thaliana |
| AT5G38900:exon:9 |
78
|
Chr5: 15573745-15573822 | Arabidopsis thaliana |
| AT5G38900:exon:8 |
57
|
Chr5: 15573938-15573994 | Arabidopsis thaliana |
| AT5G38900:exon:7 |
85
|
Chr5: 15574079-15574163 | Arabidopsis thaliana |
| AT5G38900:exon:6 |
126
|
Chr5: 15574262-15574387 | Arabidopsis thaliana |
| AT5G38900:exon:5 |
44
|
Chr5: 15574471-15574514 | Arabidopsis thaliana |
| AT5G38900:exon:4 |
120
|
Chr5: 15574601-15574720 | Arabidopsis thaliana |
| AT5G38900:exon:3 |
155
|
Chr5: 15574802-15574956 | Arabidopsis thaliana |
| AT5G38900:exon:2 |
205
|
Chr5: 15575233-15575437 | Arabidopsis thaliana |
| AT5G05865:exon:1 |
189
|
Chr5: 15574935-15575123 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G38900:five_prime_UTR:3 |
11
|
Chr5: 15574946-15574956 | Arabidopsis thaliana |
| AT5G38900:five_prime_UTR:1 |
167
|
Chr5: 15575546-15575712 | Arabidopsis thaliana |
| AT5G38900:five_prime_UTR:2 |
159
|
Chr5: 15575279-15575437 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT5G38895 | locus:505006664 | AT5G38895 |
2273
|
Chr5: 15571254-15573526 | A. thaliana | RING/U-box superfamily protein;(source:Araport11) | NULL | RING/U-box superfamily protein | ||
| AT5G05865 | AT5G05865 |
189
|
Chr5: 15574935-15575123 | A. thaliana | Natural antisense transcript overlaps with AT5G38900;(source:Araport11) | NULL |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT5G38895.1 |
1190
|
Chr5: 15571471-15573526 |
| AT5G38900.1 |
1072
|
Chr5: 15573505-15575712 |
| AT5G38900.2 |
870
|
Chr5: 15573745-15575437 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G38895:three_prime_UTR:2 |
211
|
Chr5: 15573316-15573526 | Arabidopsis thaliana |
| AT5G38900:three_prime_UTR:1 |
240
|
Chr5: 15573505-15573744 | Arabidopsis thaliana |
Function
Gene Ontology
| cellular component | |
|---|---|
| No terms in this category. | |
| molecular function | |
|
oxidoreductase activity
|
ECO |
| biological process | |
| No terms in this category. | |
Interactions
Interaction Network
Show the following interaction types:
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