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Gene : IAA30 A. thaliana

DB identifier  ? AT3G62100 Secondary Identifier  ? locus:2098023
Name  ? indole-3-acetic acid inducible 30 Brief Description  indole-3-acetic acid inducible 30
TAIR Computational Description  indole-3-acetic acid inducible 30;(source:Araport11)
TAIR Curator Summary  Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development. Target of LEC2 and AGL15. Promotes somatyic embryogenesis.
TAIR Short Description  indole-3-acetic acid inducible 30
TAIR Aliases  IAA30

0 Gene Rifs

1 Organism

33 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1124  
Location: Chr3:22995686-22996809

Gene models - IAA30 AT3G62100

? Gene models

Transcripts: 2  Exons: 5  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A1I9LTG7_ARATH function Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
IAA30_ARATH function Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
A0A1I9LTG7_ARATH IAA30_ARATH similarity Belongs to the Aux/IAA family.

2 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
transcription cis-regulatory region binding  ? ECO  
biological process
root development  ? ECO  
response to auxin  ? ECO  
somatic embryogenesis  ? ECO  
gravitropism  ? ECO  
auxin-activated signaling pathway  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets