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Genomics
Genome feature
| Region: |
gene
|
Length: |
3610
 |
| Location: | Chr5:7310171-7313780 reverse strand | ||
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G22080:CDS:10 |
87
|
Chr5: 7310600-7310686 | Arabidopsis thaliana |
| AT5G22080:CDS:9 |
39
|
Chr5: 7310800-7310838 | Arabidopsis thaliana |
| AT5G22080:CDS:8 |
108
|
Chr5: 7311278-7311385 | Arabidopsis thaliana |
| AT5G22080:CDS:6 |
60
|
Chr5: 7311533-7311592 | Arabidopsis thaliana |
| AT5G22080:CDS:5 |
74
|
Chr5: 7312290-7312363 | Arabidopsis thaliana |
| AT5G22080:CDS:4 |
78
|
Chr5: 7312478-7312555 | Arabidopsis thaliana |
| AT5G22080:CDS:3 |
61
|
Chr5: 7312721-7312781 | Arabidopsis thaliana |
| AT5G22080:CDS:2 |
91
|
Chr5: 7312944-7313034 | Arabidopsis thaliana |
| AT5G22080:CDS:1 |
89
|
Chr5: 7313452-7313540 | Arabidopsis thaliana |
| AT5G22080:CDS:10.1 |
87
|
Chr5: 7310600-7310686 | Arabidopsis thaliana |
| AT5G22080:CDS:9.1 |
39
|
Chr5: 7310800-7310838 | Arabidopsis thaliana |
| AT5G22080:CDS:8.1 |
108
|
Chr5: 7311278-7311385 | Arabidopsis thaliana |
| AT5G22080:CDS:7 |
114
|
Chr5: 7311479-7311592 | Arabidopsis thaliana |
| AT5G22080:CDS:5.1 |
74
|
Chr5: 7312290-7312363 | Arabidopsis thaliana |
| AT5G22080:CDS:4.1 |
78
|
Chr5: 7312478-7312555 | Arabidopsis thaliana |
| AT5G22080:CDS:3.1 |
61
|
Chr5: 7312721-7312781 | Arabidopsis thaliana |
| AT5G22080:CDS:2.1 |
91
|
Chr5: 7312944-7313034 | Arabidopsis thaliana |
| AT5G22080:CDS:1.1 |
89
|
Chr5: 7313452-7313540 | Arabidopsis thaliana |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G22070:exon:2 |
424
|
Chr5: 7309944-7310367 | Arabidopsis thaliana |
| AT5G22080:exon:12 |
516
|
Chr5: 7310171-7310686 | Arabidopsis thaliana |
| AT5G22080:exon:7 |
60
|
Chr5: 7311533-7311592 | Arabidopsis thaliana |
| AT5G22080:exon:2 |
219
|
Chr5: 7313452-7313670 | Arabidopsis thaliana |
| AT5G22080:exon:11 |
309
|
Chr5: 7310378-7310686 | Arabidopsis thaliana |
| AT5G22080:exon:10 |
39
|
Chr5: 7310800-7310838 | Arabidopsis thaliana |
| AT5G22080:exon:9 |
108
|
Chr5: 7311278-7311385 | Arabidopsis thaliana |
| AT5G22080:exon:8 |
114
|
Chr5: 7311479-7311592 | Arabidopsis thaliana |
| AT5G22080:exon:6 |
74
|
Chr5: 7312290-7312363 | Arabidopsis thaliana |
| AT5G22080:exon:5 |
78
|
Chr5: 7312478-7312555 | Arabidopsis thaliana |
| AT5G22080:exon:4 |
61
|
Chr5: 7312721-7312781 | Arabidopsis thaliana |
| AT5G22080:exon:3 |
91
|
Chr5: 7312944-7313034 | Arabidopsis thaliana |
| AT5G22080:exon:1 |
329
|
Chr5: 7313452-7313780 | Arabidopsis thaliana |
Five Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G22080:five_prime_UTR:2 |
130
|
Chr5: 7313541-7313670 | Arabidopsis thaliana |
| AT5G22080:five_prime_UTR:1 |
240
|
Chr5: 7313541-7313780 | Arabidopsis thaliana |
Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT5G22070 | locus:504956440 | AT5G22070 |
2474
|
Chr5: 7307894-7310367 | A. thaliana | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) | Putative glycosyltransferase that negatively regulates leaf senescence in a SID2 dependent manner. | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | RSE1 |
mRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT5G22070.1 |
1883
|
Chr5: 7307894-7310367 |
| AT5G22080.2 |
1246
|
Chr5: 7310171-7313670 |
| AT5G22080.1 |
1203
|
Chr5: 7310378-7313780 |
Three Prime UTRs
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT5G22070:three_prime_UTR:2 |
424
|
Chr5: 7309944-7310367 | Arabidopsis thaliana |
| AT5G22080:three_prime_UTR:2 |
429
|
Chr5: 7310171-7310599 | Arabidopsis thaliana |
| AT5G22080:three_prime_UTR:1 |
222
|
Chr5: 7310378-7310599 | Arabidopsis thaliana |
Function
Gene Ontology
| cellular component | |
|---|---|
| No terms in this category. | |
| molecular function | |
| No terms in this category. | |
| biological process | |
| No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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