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Gene : RS31 A. thaliana

DB identifier  ? AT3G61860 Secondary Identifier  ? locus:2079502
Name  ? arginine/serine-rich splicing factor 31 Brief Description  RNA-binding (RRM/RBD/RNP motifs) family protein
TAIR Computational Description  RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)
TAIR Curator Summary  encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.
TAIR Short Description  RNA-binding (RRM/RBD/RNP motifs) family protein
TAIR Aliases  At-RS31, ATRSP31, RS31, RSP31

1 Gene Rifs

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1 Organism

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25 Publications

Trail: Gene

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2346  
Location: Chr3:22900050-22902395 reverse strand

Gene models - RS31 AT3G61860

? Gene models

Transcripts: 1  Exons: 6  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

Trail: Gene

1 Cross References

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1 Downstream Intergenic Region

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0 Located Features

1 Upstream Intergenic Region

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Proteins

Curated comments from UniProt

Type Comment Proteins
SRS31_ARATH function Required for constitutive and alternative pre-mRNA splicing.
SRS31_ARATH similarity Belongs to the splicing factor SR family. RS subfamily.
SRS31_ARATH subcellular location In meristematic cells, no apparent accumulation in foci.
SRS31_ARATH tissue specificity Highly expressed in roots and flowers. A presumably longer alternatively spliced form is found in leaves, stems and flowers.

1 Proteins

Trail: Gene

Function

Gene Ontology

cellular component
spliceosomal complex  ? ECO  
nuclear speck  ? ECO  
molecular function
mRNA binding  ? ECO  
biological process
RNA splicing  ? ECO  
mRNA splicing, via spliceosome  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
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Homology

Phytozome Homologs

Data Source: Phytozome


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Other

9 Data Sets

Trail: Gene