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Gene : HGO A. thaliana
DB identifier  ? AT5G54080 Secondary Identifier  ? locus:2166567
Name  ? homogentisate 1,2-dioxygenase Brief Description  homogentisate 1,2-dioxygenase
TAIR Computational Description  homogentisate 1,2-dioxygenase;(source:Araport11)
TAIR Curator Summary  Encodes a homogentisate 1,2-dioxygenase that can convert homogentisate to malylacetoacetate and is likely to be involved in tyrosine catabolism.
TAIR Short Description  homogentisate 1,2-dioxygenase
TAIR Aliases  AtHGO, HGO
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0 Gene Rifs

1 Organism

Trail: Gene

14 Publications

Trail: Gene

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3049  
Location: Chr5:21945865-21948913

Gene models - HGO AT5G54080

? Gene models

Transcripts: 2  Exons: 19  Introns: 17 

Overlapping Features

? Genome features that overlap coordinates of this Gene

CDSs: 21, Exons: 14, Five Prime UTR: 1, Gene: 1, mRNAs: 3, Three Prime UTRs: 4
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13 Child Features

Trail: Gene

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Trail: Gene

Proteins

Show proteins
Curated comments from UniProt

Type Comment Proteins
HGD_ARATH pathway Amino-acid degradation; L-phenylalanine degradation; acetoacetate and fumarate from L-phenylalanine: step 4/6.
HGD_ARATH similarity Belongs to the homogentisate dioxygenase family.

1 Proteins

Trail: Gene

Function

Gene Ontology

cellular component
plastid  ? ECO  
molecular function
homogentisate 1,2-dioxygenase activity  ? ECO  
metal ion binding  ? ECO  
biological process
homogentisate catabolic process  ? ECO  
L-phenylalanine catabolic process  ? ECO  
tyrosine catabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
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Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets

Trail: Gene





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