Genomics
Transcript | Exons | Introns | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PEPC1
AT1G17710.1
1250 |
|
|
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PEPC1
AT1G17710.2
1210 |
|
|
Overlapping Features
Genome features that overlap coordinates of this MRNA
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17710:CDS:5 | 369 | Chr1: 6090763-6091131 | Arabidopsis thaliana |
AT1G17710:CDS:4 | 202 | Chr1: 6091309-6091510 | Arabidopsis thaliana |
AT1G17710:CDS:3 | 122 | Chr1: 6091583-6091704 | Arabidopsis thaliana |
AT1G17710:CDS:1 | 147 | Chr1: 6091829-6091975 | Arabidopsis thaliana |
AT1G17710:CDS:5.1 | 369 | Chr1: 6090763-6091131 | Arabidopsis thaliana |
AT1G17710:CDS:4.1 | 202 | Chr1: 6091309-6091510 | Arabidopsis thaliana |
AT1G17710:CDS:2 | 173 | Chr1: 6091583-6091755 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17710:exon:6 | 727 | Chr1: 6090405-6091131 | Arabidopsis thaliana |
AT1G17710:exon:3 | 122 | Chr1: 6091583-6091704 | Arabidopsis thaliana |
AT1G17710:exon:1 | 199 | Chr1: 6091829-6092027 | Arabidopsis thaliana |
AT1G17710:exon:5 | 572 | Chr1: 6090560-6091131 | Arabidopsis thaliana |
AT1G17710:exon:4 | 202 | Chr1: 6091309-6091510 | Arabidopsis thaliana |
AT1G17710:exon:2 | 436 | Chr1: 6091583-6092018 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17710:five_prime_UTR:1 | 52 | Chr1: 6091976-6092027 | Arabidopsis thaliana |
AT1G17710:five_prime_UTR:2 | 263 | Chr1: 6091756-6092018 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G17710 | locus:2007958 | PEPC1 | phosphoethanolamine/phosphocholine phosphatase 1 | 1623 | Chr1: 6090405-6092027 | A. thaliana | Pyridoxal phosphate phosphatase-related protein;(source:Araport11) | Encodes a phosphoethanolamine/phosphocholine phosphatase. It is likely to be involved in the liberation of inorganic phosphate from intracellular sources. Expression is upregulated in the shoot of cax1/cax3 mutant. | Pyridoxal phosphate phosphatase-related protein | AtPEPC1, PEPC1 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17710:three_prime_UTR:2 | 358 | Chr1: 6090405-6090762 | Arabidopsis thaliana |
AT1G17710:three_prime_UTR:1 | 203 | Chr1: 6090560-6090762 | Arabidopsis thaliana |