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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G67180:CDS:12 | 210 | Chr5: 26802119-26802328 | Arabidopsis thaliana |
AT5G67180:CDS:10 | 77 | Chr5: 26802417-26802493 | Arabidopsis thaliana |
AT5G67180:CDS:8 | 95 | Chr5: 26802569-26802663 | Arabidopsis thaliana |
AT5G67180:CDS:6 | 45 | Chr5: 26802755-26802799 | Arabidopsis thaliana |
AT5G67180:CDS:5 | 146 | Chr5: 26802903-26803048 | Arabidopsis thaliana |
AT5G67180:CDS:4 | 88 | Chr5: 26803158-26803245 | Arabidopsis thaliana |
AT5G67180:CDS:3 | 31 | Chr5: 26803347-26803377 | Arabidopsis thaliana |
AT5G67180:CDS:2 | 26 | Chr5: 26803485-26803510 | Arabidopsis thaliana |
AT5G67180:CDS:1 | 341 | Chr5: 26803594-26803934 | Arabidopsis thaliana |
AT5G67180:CDS:11 | 128 | Chr5: 26802366-26802493 | Arabidopsis thaliana |
AT5G67180:CDS:8.1 | 95 | Chr5: 26802569-26802663 | Arabidopsis thaliana |
AT5G67180:CDS:6.1 | 45 | Chr5: 26802755-26802799 | Arabidopsis thaliana |
AT5G67180:CDS:5.1 | 146 | Chr5: 26802903-26803048 | Arabidopsis thaliana |
AT5G67180:CDS:4.1 | 88 | Chr5: 26803158-26803245 | Arabidopsis thaliana |
AT5G67180:CDS:3.1 | 31 | Chr5: 26803347-26803377 | Arabidopsis thaliana |
AT5G67180:CDS:2.1 | 26 | Chr5: 26803485-26803510 | Arabidopsis thaliana |
AT5G67180:CDS:1.1 | 341 | Chr5: 26803594-26803934 | Arabidopsis thaliana |
AT5G67180:CDS:9 | 160 | Chr5: 26802504-26802663 | Arabidopsis thaliana |
AT5G67180:CDS:6.2 | 45 | Chr5: 26802755-26802799 | Arabidopsis thaliana |
AT5G67180:CDS:5.2 | 146 | Chr5: 26802903-26803048 | Arabidopsis thaliana |
AT5G67180:CDS:4.2 | 88 | Chr5: 26803158-26803245 | Arabidopsis thaliana |
AT5G67180:CDS:3.2 | 31 | Chr5: 26803347-26803377 | Arabidopsis thaliana |
AT5G67180:CDS:2.2 | 26 | Chr5: 26803485-26803510 | Arabidopsis thaliana |
AT5G67180:CDS:1.2 | 341 | Chr5: 26803594-26803934 | Arabidopsis thaliana |
AT5G67180:CDS:7 | 130 | Chr5: 26802670-26802799 | Arabidopsis thaliana |
AT5G67180:CDS:5.3 | 146 | Chr5: 26802903-26803048 | Arabidopsis thaliana |
AT5G67180:CDS:4.3 | 88 | Chr5: 26803158-26803245 | Arabidopsis thaliana |
AT5G67180:CDS:3.3 | 31 | Chr5: 26803347-26803377 | Arabidopsis thaliana |
AT5G67180:CDS:2.3 | 26 | Chr5: 26803485-26803510 | Arabidopsis thaliana |
AT5G67180:CDS:1.3 | 341 | Chr5: 26803594-26803934 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G67170:exon:15 | 182 | Chr5: 26801886-26802067 | Arabidopsis thaliana |
AT5G67180:exon:13 | 380 | Chr5: 26801949-26802328 | Arabidopsis thaliana |
AT5G67180:exon:11 | 77 | Chr5: 26802417-26802493 | Arabidopsis thaliana |
AT5G67180:exon:12 | 128 | Chr5: 26802366-26802493 | Arabidopsis thaliana |
AT5G67180:exon:9 | 95 | Chr5: 26802569-26802663 | Arabidopsis thaliana |
AT5G67180:exon:1 | 678 | Chr5: 26803594-26804271 | Arabidopsis thaliana |
AT5G67180:exon:10 | 160 | Chr5: 26802504-26802663 | Arabidopsis thaliana |
AT5G67180:exon:7 | 45 | Chr5: 26802755-26802799 | Arabidopsis thaliana |
AT5G67180:exon:8 | 130 | Chr5: 26802670-26802799 | Arabidopsis thaliana |
AT5G67180:exon:6 | 146 | Chr5: 26802903-26803048 | Arabidopsis thaliana |
AT5G67180:exon:5 | 88 | Chr5: 26803158-26803245 | Arabidopsis thaliana |
AT5G67180:exon:4 | 31 | Chr5: 26803347-26803377 | Arabidopsis thaliana |
AT5G67180:exon:3 | 26 | Chr5: 26803485-26803510 | Arabidopsis thaliana |
AT5G67180:exon:2 | 656 | Chr5: 26803594-26804249 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G67180:five_prime_UTR:1 | 337 | Chr5: 26803935-26804271 | Arabidopsis thaliana |
AT5G67180:five_prime_UTR:2 | 315 | Chr5: 26803935-26804249 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G67170 | locus:2155588 | AT5G67170 | 2330 | Chr5: 26799738-26802067 | A. thaliana | SEC-C motif-containing protein / OTU-like cysteine protease family protein;(source:Araport11) | NULL | SEC-C motif-containing protein / OTU-like cysteine protease family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G67170.1 | 1415 | Chr5: 26799766-26802067 |
AT5G67180.1 | 1544 | Chr5: 26801949-26804249 |
AT5G67180.2 | 1237 | Chr5: 26802366-26804271 |
AT5G67180.3 | 1152 | Chr5: 26802504-26804249 |
AT5G67180.4 | 1077 | Chr5: 26802670-26804249 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G67170:three_prime_UTR:2 | 182 | Chr5: 26801886-26802067 | Arabidopsis thaliana |
AT5G67180:three_prime_UTR:1 | 170 | Chr5: 26801949-26802118 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
TOE3_ARATH | function | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). May regulate negatively the transition to flowering time and confers flowering time delay. |
TOE3_ARATH | similarity | Belongs to the AP2/ERF transcription factor family. AP2 subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
DNA-binding transcription factor activity | ECO |
DNA binding | ECO |
biological process | |
ethylene-activated signaling pathway | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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