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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G66240:CDS:1 | 7 | Chr5: 26466268-26466274 | Arabidopsis thaliana |
AT5G66240:CDS:3 | 80 | Chr5: 26466364-26466443 | Arabidopsis thaliana |
AT5G66240:CDS:4 | 101 | Chr5: 26466530-26466630 | Arabidopsis thaliana |
AT5G66240:CDS:5 | 101 | Chr5: 26466720-26466820 | Arabidopsis thaliana |
AT5G66240:CDS:6 | 67 | Chr5: 26466900-26466966 | Arabidopsis thaliana |
AT5G66240:CDS:7 | 100 | Chr5: 26467053-26467152 | Arabidopsis thaliana |
AT5G66240:CDS:8 | 114 | Chr5: 26467230-26467343 | Arabidopsis thaliana |
AT5G66240:CDS:9 | 138 | Chr5: 26467479-26467616 | Arabidopsis thaliana |
AT5G66240:CDS:10 | 85 | Chr5: 26467724-26467808 | Arabidopsis thaliana |
AT5G66240:CDS:12 | 44 | Chr5: 26467913-26467956 | Arabidopsis thaliana |
AT5G66240:CDS:13 | 144 | Chr5: 26468058-26468201 | Arabidopsis thaliana |
AT5G66240:CDS:2 | 96 | Chr5: 26466348-26466443 | Arabidopsis thaliana |
AT5G66240:CDS:4.1 | 101 | Chr5: 26466530-26466630 | Arabidopsis thaliana |
AT5G66240:CDS:5.1 | 101 | Chr5: 26466720-26466820 | Arabidopsis thaliana |
AT5G66240:CDS:6.1 | 67 | Chr5: 26466900-26466966 | Arabidopsis thaliana |
AT5G66240:CDS:7.1 | 100 | Chr5: 26467053-26467152 | Arabidopsis thaliana |
AT5G66240:CDS:8.1 | 114 | Chr5: 26467230-26467343 | Arabidopsis thaliana |
AT5G66240:CDS:9.1 | 138 | Chr5: 26467479-26467616 | Arabidopsis thaliana |
AT5G66240:CDS:10.1 | 85 | Chr5: 26467724-26467808 | Arabidopsis thaliana |
AT5G66240:CDS:11 | 50 | Chr5: 26467907-26467956 | Arabidopsis thaliana |
AT5G66240:CDS:13.1 | 144 | Chr5: 26468058-26468201 | Arabidopsis thaliana |
AT5G66240:CDS:1.1 | 7 | Chr5: 26466268-26466274 | Arabidopsis thaliana |
AT5G66240:CDS:3.1 | 80 | Chr5: 26466364-26466443 | Arabidopsis thaliana |
AT5G66240:CDS:4.2 | 101 | Chr5: 26466530-26466630 | Arabidopsis thaliana |
AT5G66240:CDS:5.2 | 101 | Chr5: 26466720-26466820 | Arabidopsis thaliana |
AT5G66240:CDS:6.2 | 67 | Chr5: 26466900-26466966 | Arabidopsis thaliana |
AT5G66240:CDS:7.2 | 100 | Chr5: 26467053-26467152 | Arabidopsis thaliana |
AT5G66240:CDS:8.2 | 114 | Chr5: 26467230-26467343 | Arabidopsis thaliana |
AT5G66240:CDS:9.2 | 138 | Chr5: 26467479-26467616 | Arabidopsis thaliana |
AT5G66240:CDS:10.2 | 85 | Chr5: 26467724-26467808 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G66240:exon:1 | 103 | Chr5: 26466172-26466274 | Arabidopsis thaliana |
AT5G66240:exon:13 | 44 | Chr5: 26467913-26467956 | Arabidopsis thaliana |
AT5G66240:exon:14 | 267 | Chr5: 26468058-26468324 | Arabidopsis thaliana |
AT5G66240:exon:3 | 270 | Chr5: 26466174-26466443 | Arabidopsis thaliana |
AT5G66240:exon:2 | 101 | Chr5: 26466174-26466274 | Arabidopsis thaliana |
AT5G66240:exon:4 | 80 | Chr5: 26466364-26466443 | Arabidopsis thaliana |
AT5G66240:exon:5 | 101 | Chr5: 26466530-26466630 | Arabidopsis thaliana |
AT5G66240:exon:6 | 101 | Chr5: 26466720-26466820 | Arabidopsis thaliana |
AT5G66240:exon:7 | 67 | Chr5: 26466900-26466966 | Arabidopsis thaliana |
AT5G66240:exon:8 | 100 | Chr5: 26467053-26467152 | Arabidopsis thaliana |
AT5G66240:exon:9 | 114 | Chr5: 26467230-26467343 | Arabidopsis thaliana |
AT5G66240:exon:10 | 138 | Chr5: 26467479-26467616 | Arabidopsis thaliana |
AT5G66240:exon:11 | 85 | Chr5: 26467724-26467808 | Arabidopsis thaliana |
AT5G66240:exon:12 | 50 | Chr5: 26467907-26467956 | Arabidopsis thaliana |
AT5G66240:exon:15 | 427 | Chr5: 26468058-26468484 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G66240:five_prime_UTR:1 | 96 | Chr5: 26466172-26466267 | Arabidopsis thaliana |
AT5G66240:five_prime_UTR:3 | 174 | Chr5: 26466174-26466347 | Arabidopsis thaliana |
AT5G66240:five_prime_UTR:2 | 94 | Chr5: 26466174-26466267 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G66240.3 | 1200 | Chr5: 26466172-26468324 |
AT5G66240.2 | 1453 | Chr5: 26466174-26468484 |
AT5G66240.1 | 1364 | Chr5: 26466174-26468484 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G66240:three_prime_UTR:1 | 123 | Chr5: 26468202-26468324 | Arabidopsis thaliana |
AT5G66240:three_prime_UTR:2 | 283 | Chr5: 26468202-26468484 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
Cul4-RING E3 ubiquitin ligase complex | ECO |
nucleus | ECO |
cytoplasm | ECO |
molecular function | |
No terms in this category. | |
biological process | |
plant-type cell wall modification | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...