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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G64400:CDS:1 | 22 | Chr5: 25748922-25748943 | Arabidopsis thaliana |
AT5G64400:CDS:2 | 57 | Chr5: 25749244-25749300 | Arabidopsis thaliana |
AT5G64400:CDS:3 | 87 | Chr5: 25749415-25749501 | Arabidopsis thaliana |
AT5G64400:CDS:5 | 170 | Chr5: 25749625-25749794 | Arabidopsis thaliana |
AT5G64400:CDS:7 | 99 | Chr5: 25750084-25750182 | Arabidopsis thaliana |
AT5G64400:CDS:4 | 34 | Chr5: 25749468-25749501 | Arabidopsis thaliana |
AT5G64400:CDS:6 | 323 | Chr5: 25749625-25749947 | Arabidopsis thaliana |
AT5G64400:CDS:1.1 | 22 | Chr5: 25748922-25748943 | Arabidopsis thaliana |
AT5G64400:CDS:2.1 | 57 | Chr5: 25749244-25749300 | Arabidopsis thaliana |
AT5G64400:CDS:3.1 | 87 | Chr5: 25749415-25749501 | Arabidopsis thaliana |
AT5G64400:CDS:6.1 | 323 | Chr5: 25749625-25749947 | Arabidopsis thaliana |
AT5G64395:CDS:1 | 96 | Chr5: 25748202-25748297 | Arabidopsis thaliana |
AT5G64401:CDS:1 | 162 | Chr5: 25750441-25750602 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G64390:exon:9 | 2011 | Chr5: 25746565-25748575 | Arabidopsis thaliana |
AT5G64390:exon:11 | 1360 | Chr5: 25747216-25748575 | Arabidopsis thaliana |
AT5G64400:exon:1 | 1088 | Chr5: 25747856-25748943 | Arabidopsis thaliana |
AT5G64400:exon:6 | 170 | Chr5: 25749625-25749794 | Arabidopsis thaliana |
AT5G64400:exon:8 | 747 | Chr5: 25750084-25750830 | Arabidopsis thaliana |
AT5G64400:exon:3 | 283 | Chr5: 25748840-25749122 | Arabidopsis thaliana |
AT5G64400:exon:2 | 104 | Chr5: 25748840-25748943 | Arabidopsis thaliana |
AT5G64400:exon:4 | 57 | Chr5: 25749244-25749300 | Arabidopsis thaliana |
AT5G64400:exon:5 | 87 | Chr5: 25749415-25749501 | Arabidopsis thaliana |
AT5G64400:exon:7 | 732 | Chr5: 25749625-25750356 | Arabidopsis thaliana |
AT5G64395:exon:1 | 96 | Chr5: 25748202-25748297 | Arabidopsis thaliana |
AT5G64401:exon:1 | 162 | Chr5: 25750441-25750602 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G64400:five_prime_UTR:1 | 1066 | Chr5: 25747856-25748921 | Arabidopsis thaliana |
AT5G64400:five_prime_UTR:3 | 283 | Chr5: 25748840-25749122 | Arabidopsis thaliana |
AT5G64400:five_prime_UTR:4 | 57 | Chr5: 25749244-25749300 | Arabidopsis thaliana |
AT5G64400:five_prime_UTR:5 | 53 | Chr5: 25749415-25749467 | Arabidopsis thaliana |
AT5G64400:five_prime_UTR:2 | 82 | Chr5: 25748840-25748921 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G64390 | locus:2173378 | HEN4 | HUA ENHANCER 4 | 5232 | Chr5: 25743344-25748575 | A. thaliana | RNA-binding KH domain-containing protein;(source:Araport11) | encodes a K homology (KH) domain-containing, putative RNA binding protein that interacts with HUA1, a CCCH zinc finger RNA binding protein in the nucleus. HEN4 acts redundantly with HUA1 and HUA2 in the specification of floral organ identity in the third whorl. The mRNA is cell-to-cell mobile. | RNA-binding KH domain-containing protein | AtKH30, HEN4 |
AT5G64395 | locus:4515103756 | AT5G64395 | 96 | Chr5: 25748202-25748297 | A. thaliana | hypothetical protein;(source:Araport11) | This gene encodes a small protein and has either evidence of transcription or purifying selection. | NULL | ||
AT5G64401 | locus:4515103757 | AT5G64401 | 162 | Chr5: 25750441-25750602 | A. thaliana | hypothetical protein;(source:Araport11) | Highly expressed in root hair cells. | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G64390.2 | 4406 | Chr5: 25743344-25748575 |
AT5G64390.1 | 3867 | Chr5: 25743344-25748575 |
AT5G64400.1 | 2149 | Chr5: 25747856-25750830 |
AT5G64400.3 | 1159 | Chr5: 25748840-25750356 |
AT5G64400.2 | 980 | Chr5: 25748840-25750356 |
AT5G64395.1 | 96 | Chr5: 25748202-25748297 |
AT5G64401.1 | 162 | Chr5: 25750441-25750602 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G64390:three_prime_UTR:1 | 1833 | Chr5: 25746743-25748575 | Arabidopsis thaliana |
AT5G64390:three_prime_UTR:3 | 1195 | Chr5: 25747381-25748575 | Arabidopsis thaliana |
AT5G64400:three_prime_UTR:2 | 648 | Chr5: 25750183-25750830 | Arabidopsis thaliana |
AT5G64400:three_prime_UTR:1 | 409 | Chr5: 25749948-25750356 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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