External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 23, Exons: 14, Five Prime UTRs: 3, mRNAs: 2, Three Prime UTR: 1, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G62110:CDS:13 | 57 | Chr5: 24942339-24942395 | Arabidopsis thaliana |
AT5G62110:CDS:12 | 117 | Chr5: 24942916-24943032 | Arabidopsis thaliana |
AT5G62110:CDS:11 | 51 | Chr5: 24943226-24943276 | Arabidopsis thaliana |
AT5G62110:CDS:10 | 93 | Chr5: 24943374-24943466 | Arabidopsis thaliana |
AT5G62110:CDS:9 | 93 | Chr5: 24943563-24943655 | Arabidopsis thaliana |
AT5G62110:CDS:8 | 93 | Chr5: 24943749-24943841 | Arabidopsis thaliana |
AT5G62110:CDS:7 | 120 | Chr5: 24943950-24944069 | Arabidopsis thaliana |
AT5G62110:CDS:6 | 120 | Chr5: 24944166-24944285 | Arabidopsis thaliana |
AT5G62110:CDS:5 | 93 | Chr5: 24944365-24944457 | Arabidopsis thaliana |
AT5G62110:CDS:4 | 117 | Chr5: 24944555-24944671 | Arabidopsis thaliana |
AT5G62110:CDS:3 | 617 | Chr5: 24944770-24945386 | Arabidopsis thaliana |
AT5G62110:CDS:1 | 130 | Chr5: 24945486-24945615 | Arabidopsis thaliana |
AT5G62110:CDS:13.1 | 57 | Chr5: 24942339-24942395 | Arabidopsis thaliana |
AT5G62110:CDS:12.1 | 117 | Chr5: 24942916-24943032 | Arabidopsis thaliana |
AT5G62110:CDS:11.1 | 51 | Chr5: 24943226-24943276 | Arabidopsis thaliana |
AT5G62110:CDS:10.1 | 93 | Chr5: 24943374-24943466 | Arabidopsis thaliana |
AT5G62110:CDS:9.1 | 93 | Chr5: 24943563-24943655 | Arabidopsis thaliana |
AT5G62110:CDS:8.1 | 93 | Chr5: 24943749-24943841 | Arabidopsis thaliana |
AT5G62110:CDS:7.1 | 120 | Chr5: 24943950-24944069 | Arabidopsis thaliana |
AT5G62110:CDS:6.1 | 120 | Chr5: 24944166-24944285 | Arabidopsis thaliana |
AT5G62110:CDS:5.1 | 93 | Chr5: 24944365-24944457 | Arabidopsis thaliana |
AT5G62110:CDS:4.1 | 117 | Chr5: 24944555-24944671 | Arabidopsis thaliana |
AT5G62110:CDS:2 | 642 | Chr5: 24944770-24945411 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G62110:exon:4 | 617 | Chr5: 24944770-24945386 | Arabidopsis thaliana |
AT5G62110:exon:2 | 160 | Chr5: 24945486-24945645 | Arabidopsis thaliana |
AT5G62110:exon:14 | 227 | Chr5: 24942169-24942395 | Arabidopsis thaliana |
AT5G62110:exon:13 | 117 | Chr5: 24942916-24943032 | Arabidopsis thaliana |
AT5G62110:exon:12 | 51 | Chr5: 24943226-24943276 | Arabidopsis thaliana |
AT5G62110:exon:11 | 93 | Chr5: 24943374-24943466 | Arabidopsis thaliana |
AT5G62110:exon:10 | 93 | Chr5: 24943563-24943655 | Arabidopsis thaliana |
AT5G62110:exon:9 | 93 | Chr5: 24943749-24943841 | Arabidopsis thaliana |
AT5G62110:exon:8 | 120 | Chr5: 24943950-24944069 | Arabidopsis thaliana |
AT5G62110:exon:7 | 120 | Chr5: 24944166-24944285 | Arabidopsis thaliana |
AT5G62110:exon:6 | 93 | Chr5: 24944365-24944457 | Arabidopsis thaliana |
AT5G62110:exon:5 | 117 | Chr5: 24944555-24944671 | Arabidopsis thaliana |
AT5G62110:exon:3 | 676 | Chr5: 24944770-24945445 | Arabidopsis thaliana |
AT5G62110:exon:1 | 54 | Chr5: 24946034-24946087 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G62110:five_prime_UTR:2 | 30 | Chr5: 24945616-24945645 | Arabidopsis thaliana |
AT5G62110:five_prime_UTR:3 | 34 | Chr5: 24945412-24945445 | Arabidopsis thaliana |
AT5G62110:five_prime_UTR:1 | 54 | Chr5: 24946034-24946087 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G62110.1 | 1901 | Chr5: 24942169-24945645 |
AT5G62110.2 | 1854 | Chr5: 24942169-24946087 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G62110:three_prime_UTR:1 | 170 | Chr5: 24942169-24942338 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE89760 | 1941 | Chr5: 24942028-24943968 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE89760:transposon_fragment:1 | 1941 | Chr5: 24942028-24943968 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
DNA binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...