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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G61240:CDS:1 | 85 | Chr5: 24629485-24629569 | Arabidopsis thaliana |
AT5G61240:CDS:2 | 148 | Chr5: 24629916-24630063 | Arabidopsis thaliana |
AT5G61240:CDS:3 | 72 | Chr5: 24630140-24630211 | Arabidopsis thaliana |
AT5G61240:CDS:5 | 76 | Chr5: 24630385-24630460 | Arabidopsis thaliana |
AT5G61240:CDS:6 | 35 | Chr5: 24630548-24630582 | Arabidopsis thaliana |
AT5G61240:CDS:7 | 72 | Chr5: 24630669-24630740 | Arabidopsis thaliana |
AT5G61240:CDS:8 | 144 | Chr5: 24630838-24630981 | Arabidopsis thaliana |
AT5G61240:CDS:9 | 81 | Chr5: 24631078-24631158 | Arabidopsis thaliana |
AT5G61240:CDS:10 | 72 | Chr5: 24631257-24631328 | Arabidopsis thaliana |
AT5G61240:CDS:11 | 72 | Chr5: 24631408-24631479 | Arabidopsis thaliana |
AT5G61240:CDS:12 | 72 | Chr5: 24631585-24631656 | Arabidopsis thaliana |
AT5G61240:CDS:13 | 91 | Chr5: 24631868-24631958 | Arabidopsis thaliana |
AT5G61240:CDS:1.1 | 85 | Chr5: 24629485-24629569 | Arabidopsis thaliana |
AT5G61240:CDS:2.1 | 148 | Chr5: 24629916-24630063 | Arabidopsis thaliana |
AT5G61240:CDS:3.1 | 72 | Chr5: 24630140-24630211 | Arabidopsis thaliana |
AT5G61240:CDS:4 | 72 | Chr5: 24630385-24630456 | Arabidopsis thaliana |
AT5G61240:CDS:7.1 | 72 | Chr5: 24630669-24630740 | Arabidopsis thaliana |
AT5G61240:CDS:8.1 | 144 | Chr5: 24630838-24630981 | Arabidopsis thaliana |
AT5G61240:CDS:9.1 | 81 | Chr5: 24631078-24631158 | Arabidopsis thaliana |
AT5G61240:CDS:10.1 | 72 | Chr5: 24631257-24631328 | Arabidopsis thaliana |
AT5G61240:CDS:11.1 | 72 | Chr5: 24631408-24631479 | Arabidopsis thaliana |
AT5G61240:CDS:12.1 | 72 | Chr5: 24631585-24631656 | Arabidopsis thaliana |
AT5G61240:CDS:13.1 | 91 | Chr5: 24631868-24631958 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G61240:exon:1 | 314 | Chr5: 24629256-24629569 | Arabidopsis thaliana |
AT5G61240:exon:6 | 76 | Chr5: 24630385-24630460 | Arabidopsis thaliana |
AT5G61240:exon:7 | 35 | Chr5: 24630548-24630582 | Arabidopsis thaliana |
AT5G61240:exon:14 | 335 | Chr5: 24631868-24632202 | Arabidopsis thaliana |
AT5G61240:exon:2 | 312 | Chr5: 24629258-24629569 | Arabidopsis thaliana |
AT5G61240:exon:3 | 148 | Chr5: 24629916-24630063 | Arabidopsis thaliana |
AT5G61240:exon:4 | 72 | Chr5: 24630140-24630211 | Arabidopsis thaliana |
AT5G61240:exon:5 | 72 | Chr5: 24630385-24630456 | Arabidopsis thaliana |
AT5G61240:exon:8 | 72 | Chr5: 24630669-24630740 | Arabidopsis thaliana |
AT5G61240:exon:9 | 144 | Chr5: 24630838-24630981 | Arabidopsis thaliana |
AT5G61240:exon:10 | 81 | Chr5: 24631078-24631158 | Arabidopsis thaliana |
AT5G61240:exon:11 | 72 | Chr5: 24631257-24631328 | Arabidopsis thaliana |
AT5G61240:exon:12 | 72 | Chr5: 24631408-24631479 | Arabidopsis thaliana |
AT5G61240:exon:13 | 72 | Chr5: 24631585-24631656 | Arabidopsis thaliana |
AT5G61240:exon:15 | 344 | Chr5: 24631868-24632211 | Arabidopsis thaliana |
AT5G61250:exon:13 | 524 | Chr5: 24632154-24632677 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G61240:five_prime_UTR:1 | 229 | Chr5: 24629256-24629484 | Arabidopsis thaliana |
AT5G61240:five_prime_UTR:2 | 227 | Chr5: 24629258-24629484 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G61250 | locus:2163243 | GUS1 | glucuronidase 1 | 3159 | Chr5: 24632154-24635312 | A. thaliana | glucuronidase 1;(source:Araport11) | Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted. | glucuronidase 1 | AtGUS1, GUS1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G61240.2 | 1493 | Chr5: 24629256-24632202 |
AT5G61240.1 | 1461 | Chr5: 24629258-24632211 |
AT5G61250.1 | 1920 | Chr5: 24632154-24634884 |
AT5G61250.2 | 1918 | Chr5: 24632154-24635312 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G61240:three_prime_UTR:1 | 244 | Chr5: 24631959-24632202 | Arabidopsis thaliana |
AT5G61240:three_prime_UTR:2 | 253 | Chr5: 24631959-24632211 | Arabidopsis thaliana |
AT5G61250:three_prime_UTR:1 | 140 | Chr5: 24632154-24632293 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
trans-Golgi network | ECO |
Golgi trans cisterna | ECO |
Golgi apparatus | ECO |
endosome | ECO |
secretory vesicle | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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