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Gene : TCP5 A. thaliana

DB identifier  ? AT5G60970 Secondary Identifier  ? locus:2173557
Name  ? TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 Brief Description  TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5
TAIR Computational Description  TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5;(source:Araport11)
TAIR Curator Summary  TCP gene involved in heterochronic control of leaf differentiation. Transcription factor which controls thermomorphogenesis by positively regulating PIF4 activity.
TAIR Short Description  TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5
TAIR Aliases  TCP5

1 Gene Rifs

1 Organism

22 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1908  
Location: Chr5:24535337-24537244 reverse strand

Gene models - TCP5 AT5G60970

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TCP5_ARATH developmental stage Expressed during ovule development (PubMed:25378179).
TCP5_ARATH function Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Participates in ovule develpment (PubMed:25378179).
TCP5_ARATH tissue specificity Expressed in cotyledons, particularly in the vascular region, in leaves, buds, flowers and immature siliques.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
DNA binding  ? ECO  
biological process
leaf morphogenesis  ? ECO  
leaf senescence  ? ECO  
response to heat  ? ECO  
regulation of DNA-templated transcription  ? ECO  
leaf development  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets