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Gene : RUG3 A. thaliana

DB identifier  ? AT5G60870 Secondary Identifier  ? locus:2159295
Name  ? RCC1/UVR8/GEF-like 3 Brief Description  Regulator of chromosome condensation (RCC1) family protein
TAIR Computational Description  Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)
TAIR Curator Summary  Encodes a mitochondrial protein RUG3 that is required for accumulation of mitochondrial respiratory chain complex I. RUG3 is related to human REGULATOR OF CHROMOSOME CONDENSATION 1 (RCC1) and Arabidopsis UV-B RESISTANCE 8 (UVR8).
TAIR Short Description  Regulator of chromosome condensation (RCC1) family protein
TAIR Aliases  RUG3

3 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2252  
Location: Chr5:24485655-24487906 reverse strand

Gene models - RUG3 AT5G60870

? Gene models

Transcripts: 4  Exons: 23  Introns: 19 

Overlapping Features

? Genome features that overlap coordinates of this Gene

15 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RUG3_ARATH RUG3_ARATH-2 RUG3_ARATH-3 function Regulates DNA damage response (DDR) synergistically with ATM (PubMed:28262819). Together with ATM, involved in the splicing of the ND2/NAD2 mRNA (PubMed:21623974, PubMed:28262819). Required for the accumulation of mitochondrial respiratory chain complex I (PubMed:21623974). Negative regulator of plant responses to abscisic acid (ABA) (PubMed:28613105). May have a pivotal role in vegetative growth and the phase transition from vegetative to reproductive growth (PubMed:28262819).
RUG3_ARATH RUG3_ARATH-2 RUG3_ARATH-3 tissue specificity Mostly expressed in roots and rosette leaves of young seedlings, and, to a lower extent, in the flowers and siliques of mature plants. Preferentially expressed in the vascular tissues.

4 Proteins

Function

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets