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Gene : OTP80 A. thaliana

DB identifier  ? AT5G59200 Secondary Identifier  ? locus:2168534
Name  ? ORGANELLE TRANSCRIPT PROCESSING 80 Brief Description  Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Computational Description  Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes a chloroplast RNA editing factor.
TAIR Short Description  Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Aliases  OTP80

1 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1639  
Location: Chr5:23888793-23890431 reverse strand

Gene models - OTP80 AT5G59200

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

CDS: 1, Exon: 1, Five Prime UTR: 1, mRNA: 1

2 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PP435_ARATH function Involved in RNA editing event in chloroplasts. Required for the editing of a single site in rpl23 transcript.
PP435_ARATH similarity Belongs to the PPR family. PCMP-E subfamily.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast  ? ECO  
molecular function
No terms in this category.
biological process
chloroplast RNA modification  ? ECO  
mRNA processing  ? ECO  
chloroplast RNA processing  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets