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Gene : SNX2a A. thaliana

DB identifier  ? AT5G58440 Secondary Identifier  ? locus:2171218
Name  ? sorting nexin 2A Brief Description  sorting nexin 2A
TAIR Computational Description  sorting nexin 2A;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  sorting nexin 2A
TAIR Aliases  SNX2a

1 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3164  
Location: Chr5:23623794-23626957 reverse strand

Gene models - SNX2a AT5G58440

? Gene models

Transcripts: 1  Exons: 5  Introns: 4 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SNX2A_ARATH function Plays a role in vesicular protein sorting (By similarity). Acts at the crossroads between the secretory and endocytic pathways. Is involved in the endosome to vacuole protein transport and, as component of the membrane-associated retromer complex, is also involved in endosome-to-Golgi retrograde transport (By similarity). Also involved in the efficient sorting of seed storage protein globulin 12S.
SNX2A_ARATH similarity Belongs to the sorting nexin family.
SNX2A_ARATH tissue specificity Ubiquitously expressed but at a lower level in flowers, siliques, and senescing leaves.

1 Proteins

Function

Gene Ontology

cellular component
Golgi apparatus  ? ECO  
multivesicular body membrane  ? ECO  
cytosol  ? ECO  
plastid  ? ECO  
retromer complex  ? ECO  
molecular function
phosphatidylinositol binding  ? ECO  
biological process
protein maturation  ? ECO  
developmental process  ? ECO  
protein transport  ? ECO  
seedling development  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets