External Links
- Aracyc
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- Plant Proteome Database
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 30, Exons: 15, Five Prime UTRs: 2, mRNAs: 3, Three Prime UTRs: 5, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58370:CDS:1 | 559 | Chr5: 23593358-23593916 | Arabidopsis thaliana |
AT5G58370:CDS:2 | 116 | Chr5: 23594002-23594117 | Arabidopsis thaliana |
AT5G58370:CDS:3 | 120 | Chr5: 23594198-23594317 | Arabidopsis thaliana |
AT5G58370:CDS:4 | 88 | Chr5: 23594415-23594502 | Arabidopsis thaliana |
AT5G58370:CDS:5 | 92 | Chr5: 23594655-23594746 | Arabidopsis thaliana |
AT5G58370:CDS:6 | 105 | Chr5: 23594823-23594927 | Arabidopsis thaliana |
AT5G58370:CDS:7 | 110 | Chr5: 23595038-23595147 | Arabidopsis thaliana |
AT5G58370:CDS:8 | 88 | Chr5: 23595227-23595314 | Arabidopsis thaliana |
AT5G58370:CDS:9 | 36 | Chr5: 23595423-23595458 | Arabidopsis thaliana |
AT5G58370:CDS:11 | 84 | Chr5: 23595562-23595645 | Arabidopsis thaliana |
AT5G58370:CDS:1.1 | 559 | Chr5: 23593358-23593916 | Arabidopsis thaliana |
AT5G58370:CDS:2.1 | 116 | Chr5: 23594002-23594117 | Arabidopsis thaliana |
AT5G58370:CDS:3.1 | 120 | Chr5: 23594198-23594317 | Arabidopsis thaliana |
AT5G58370:CDS:4.1 | 88 | Chr5: 23594415-23594502 | Arabidopsis thaliana |
AT5G58370:CDS:5.1 | 92 | Chr5: 23594655-23594746 | Arabidopsis thaliana |
AT5G58370:CDS:6.1 | 105 | Chr5: 23594823-23594927 | Arabidopsis thaliana |
AT5G58370:CDS:7.1 | 110 | Chr5: 23595038-23595147 | Arabidopsis thaliana |
AT5G58370:CDS:8.1 | 88 | Chr5: 23595227-23595314 | Arabidopsis thaliana |
AT5G58370:CDS:9.1 | 36 | Chr5: 23595423-23595458 | Arabidopsis thaliana |
AT5G58370:CDS:11.1 | 84 | Chr5: 23595562-23595645 | Arabidopsis thaliana |
AT5G58370:CDS:1.2 | 559 | Chr5: 23593358-23593916 | Arabidopsis thaliana |
AT5G58370:CDS:2.2 | 116 | Chr5: 23594002-23594117 | Arabidopsis thaliana |
AT5G58370:CDS:3.2 | 120 | Chr5: 23594198-23594317 | Arabidopsis thaliana |
AT5G58370:CDS:4.2 | 88 | Chr5: 23594415-23594502 | Arabidopsis thaliana |
AT5G58370:CDS:5.2 | 92 | Chr5: 23594655-23594746 | Arabidopsis thaliana |
AT5G58370:CDS:6.2 | 105 | Chr5: 23594823-23594927 | Arabidopsis thaliana |
AT5G58370:CDS:7.2 | 110 | Chr5: 23595038-23595147 | Arabidopsis thaliana |
AT5G58370:CDS:8.2 | 88 | Chr5: 23595227-23595314 | Arabidopsis thaliana |
AT5G58370:CDS:9.2 | 36 | Chr5: 23595423-23595458 | Arabidopsis thaliana |
AT5G58370:CDS:10 | 27 | Chr5: 23595539-23595565 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58370:exon:12 | 111 | Chr5: 23595562-23595672 | Arabidopsis thaliana |
AT5G58370:exon:15 | 458 | Chr5: 23595781-23596238 | Arabidopsis thaliana |
AT5G58370:exon:1 | 858 | Chr5: 23593059-23593916 | Arabidopsis thaliana |
AT5G58370:exon:13 | 677 | Chr5: 23595562-23596238 | Arabidopsis thaliana |
AT5G58370:exon:2 | 800 | Chr5: 23593117-23593916 | Arabidopsis thaliana |
AT5G58370:exon:3 | 116 | Chr5: 23594002-23594117 | Arabidopsis thaliana |
AT5G58370:exon:4 | 120 | Chr5: 23594198-23594317 | Arabidopsis thaliana |
AT5G58370:exon:5 | 88 | Chr5: 23594415-23594502 | Arabidopsis thaliana |
AT5G58370:exon:6 | 92 | Chr5: 23594655-23594746 | Arabidopsis thaliana |
AT5G58370:exon:7 | 105 | Chr5: 23594823-23594927 | Arabidopsis thaliana |
AT5G58370:exon:8 | 110 | Chr5: 23595038-23595147 | Arabidopsis thaliana |
AT5G58370:exon:9 | 88 | Chr5: 23595227-23595314 | Arabidopsis thaliana |
AT5G58370:exon:10 | 36 | Chr5: 23595423-23595458 | Arabidopsis thaliana |
AT5G58370:exon:11 | 134 | Chr5: 23595539-23595672 | Arabidopsis thaliana |
AT5G58370:exon:14 | 278 | Chr5: 23595781-23596058 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58370:five_prime_UTR:1 | 299 | Chr5: 23593059-23593357 | Arabidopsis thaliana |
AT5G58370:five_prime_UTR:2 | 241 | Chr5: 23593117-23593357 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G58370.2 | 2182 | Chr5: 23593059-23596238 |
AT5G58370.3 | 2290 | Chr5: 23593059-23596238 |
AT5G58370.1 | 1967 | Chr5: 23593117-23596058 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58370:three_prime_UTR:2 | 27 | Chr5: 23595646-23595672 | Arabidopsis thaliana |
AT5G58370:three_prime_UTR:5 | 458 | Chr5: 23595781-23596238 | Arabidopsis thaliana |
AT5G58370:three_prime_UTR:3 | 593 | Chr5: 23595646-23596238 | Arabidopsis thaliana |
AT5G58370:three_prime_UTR:1 | 107 | Chr5: 23595566-23595672 | Arabidopsis thaliana |
AT5G58370:three_prime_UTR:4 | 278 | Chr5: 23595781-23596058 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE84860 | 142 | Chr5: 23596200-23596341 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5TE84860:transposon_fragment:1 | 142 | Chr5: 23596200-23596341 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A654GC29_ARATH Q94C58_ARATH | similarity | Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
GTP binding | ECO |
metal ion binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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