External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58200:CDS:1 | 45 | Chr5: 23549605-23549649 | Arabidopsis thaliana |
AT5G58200:CDS:2 | 51 | Chr5: 23549738-23549788 | Arabidopsis thaliana |
AT5G58200:CDS:3 | 22 | Chr5: 23549882-23549903 | Arabidopsis thaliana |
AT5G58200:CDS:4 | 112 | Chr5: 23550032-23550143 | Arabidopsis thaliana |
AT5G58200:CDS:5 | 45 | Chr5: 23550252-23550296 | Arabidopsis thaliana |
AT5G58200:CDS:7 | 126 | Chr5: 23550793-23550918 | Arabidopsis thaliana |
AT5G58200:CDS:8 | 107 | Chr5: 23551245-23551351 | Arabidopsis thaliana |
AT5G58200:CDS:9 | 72 | Chr5: 23551441-23551512 | Arabidopsis thaliana |
AT5G58200:CDS:10 | 350 | Chr5: 23551623-23551972 | Arabidopsis thaliana |
AT5G58200:CDS:6 | 14 | Chr5: 23550283-23550296 | Arabidopsis thaliana |
AT5G58200:CDS:7.1 | 126 | Chr5: 23550793-23550918 | Arabidopsis thaliana |
AT5G58200:CDS:8.1 | 107 | Chr5: 23551245-23551351 | Arabidopsis thaliana |
AT5G58200:CDS:9.1 | 72 | Chr5: 23551441-23551512 | Arabidopsis thaliana |
AT5G58200:CDS:10.1 | 350 | Chr5: 23551623-23551972 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58190:exon:11 | 482 | Chr5: 23549124-23549605 | Arabidopsis thaliana |
AT5G58200:exon:1 | 100 | Chr5: 23549550-23549649 | Arabidopsis thaliana |
AT5G58200:exon:3 | 51 | Chr5: 23549738-23549788 | Arabidopsis thaliana |
AT5G58200:exon:4 | 22 | Chr5: 23549882-23549903 | Arabidopsis thaliana |
AT5G58200:exon:6 | 112 | Chr5: 23550032-23550143 | Arabidopsis thaliana |
AT5G58200:exon:11 | 406 | Chr5: 23551623-23552028 | Arabidopsis thaliana |
AT5G58200:exon:2 | 155 | Chr5: 23549634-23549788 | Arabidopsis thaliana |
AT5G58200:exon:5 | 262 | Chr5: 23549882-23550143 | Arabidopsis thaliana |
AT5G58200:exon:7 | 45 | Chr5: 23550252-23550296 | Arabidopsis thaliana |
AT5G58200:exon:8 | 126 | Chr5: 23550793-23550918 | Arabidopsis thaliana |
AT5G58200:exon:9 | 107 | Chr5: 23551245-23551351 | Arabidopsis thaliana |
AT5G58200:exon:10 | 72 | Chr5: 23551441-23551512 | Arabidopsis thaliana |
AT5G58200:exon:12 | 430 | Chr5: 23551623-23552052 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58200:five_prime_UTR:1 | 55 | Chr5: 23549550-23549604 | Arabidopsis thaliana |
AT5G58200:five_prime_UTR:2 | 155 | Chr5: 23549634-23549788 | Arabidopsis thaliana |
AT5G58200:five_prime_UTR:3 | 262 | Chr5: 23549882-23550143 | Arabidopsis thaliana |
AT5G58200:five_prime_UTR:4 | 31 | Chr5: 23550252-23550282 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G58190 | locus:2161213 | ECT10 | evolutionarily conserved C-terminal region 10 | 3277 | Chr5: 23546329-23549605 | A. thaliana | evolutionarily conserved C-terminal region 10;(source:Araport11) | NULL | evolutionarily conserved C-terminal region 10 | ECT10 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G58190.1 | 1931 | Chr5: 23546329-23549605 |
AT5G58200.2 | 1041 | Chr5: 23549550-23552028 |
AT5G58200.1 | 1197 | Chr5: 23549634-23552052 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58190:three_prime_UTR:2 | 242 | Chr5: 23549364-23549605 | Arabidopsis thaliana |
AT5G58200:three_prime_UTR:1 | 56 | Chr5: 23551973-23552028 | Arabidopsis thaliana |
AT5G58200:three_prime_UTR:2 | 80 | Chr5: 23551973-23552052 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...