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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G57860:CDS:1 | 3 | Chr5: 23437991-23437993 | Arabidopsis thaliana |
AT5G57860:CDS:2 | 186 | Chr5: 23438274-23438459 | Arabidopsis thaliana |
AT5G57860:CDS:4 | 40 | Chr5: 23438606-23438645 | Arabidopsis thaliana |
AT5G57860:CDS:5 | 59 | Chr5: 23439029-23439087 | Arabidopsis thaliana |
AT5G57860:CDS:1.1 | 3 | Chr5: 23437991-23437993 | Arabidopsis thaliana |
AT5G57860:CDS:2.1 | 186 | Chr5: 23438274-23438459 | Arabidopsis thaliana |
AT5G57860:CDS:4.1 | 40 | Chr5: 23438606-23438645 | Arabidopsis thaliana |
AT5G57860:CDS:5.1 | 59 | Chr5: 23439029-23439087 | Arabidopsis thaliana |
AT5G57860:CDS:1.2 | 3 | Chr5: 23437991-23437993 | Arabidopsis thaliana |
AT5G57860:CDS:2.2 | 186 | Chr5: 23438274-23438459 | Arabidopsis thaliana |
AT5G57860:CDS:4.2 | 40 | Chr5: 23438606-23438645 | Arabidopsis thaliana |
AT5G57860:CDS:5.2 | 59 | Chr5: 23439029-23439087 | Arabidopsis thaliana |
AT5G57860:CDS:1.3 | 3 | Chr5: 23437991-23437993 | Arabidopsis thaliana |
AT5G57860:CDS:3 | 201 | Chr5: 23438274-23438474 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G57860:exon:1 | 198 | Chr5: 23437532-23437729 | Arabidopsis thaliana |
AT5G57860:exon:4 | 74 | Chr5: 23437920-23437993 | Arabidopsis thaliana |
AT5G57860:exon:11 | 328 | Chr5: 23439029-23439356 | Arabidopsis thaliana |
AT5G57860:exon:6 | 38 | Chr5: 23437956-23437993 | Arabidopsis thaliana |
AT5G57860:exon:2 | 176 | Chr5: 23437554-23437729 | Arabidopsis thaliana |
AT5G57860:exon:7 | 186 | Chr5: 23438274-23438459 | Arabidopsis thaliana |
AT5G57860:exon:9 | 40 | Chr5: 23438606-23438645 | Arabidopsis thaliana |
AT5G57860:exon:12 | 375 | Chr5: 23439029-23439403 | Arabidopsis thaliana |
AT5G57860:exon:3 | 133 | Chr5: 23437597-23437729 | Arabidopsis thaliana |
AT5G57860:exon:5 | 69 | Chr5: 23437925-23437993 | Arabidopsis thaliana |
AT5G57860:exon:8 | 372 | Chr5: 23438274-23438645 | Arabidopsis thaliana |
AT5G57860:exon:10 | 283 | Chr5: 23439029-23439311 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G57860:five_prime_UTR:1 | 198 | Chr5: 23437532-23437729 | Arabidopsis thaliana |
AT5G57860:five_prime_UTR:4 | 71 | Chr5: 23437920-23437990 | Arabidopsis thaliana |
AT5G57860:five_prime_UTR:6 | 35 | Chr5: 23437956-23437990 | Arabidopsis thaliana |
AT5G57860:five_prime_UTR:2 | 176 | Chr5: 23437554-23437729 | Arabidopsis thaliana |
AT5G57860:five_prime_UTR:3 | 133 | Chr5: 23437597-23437729 | Arabidopsis thaliana |
AT5G57860:five_prime_UTR:5 | 66 | Chr5: 23437925-23437990 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G57860.2 | 826 | Chr5: 23437532-23439356 |
AT5G57860.1 | 815 | Chr5: 23437554-23439403 |
AT5G57860.3 | 846 | Chr5: 23437554-23439403 |
AT5G57860.4 | 857 | Chr5: 23437597-23439311 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G57860:three_prime_UTR:3 | 269 | Chr5: 23439088-23439356 | Arabidopsis thaliana |
AT5G57860:three_prime_UTR:4 | 316 | Chr5: 23439088-23439403 | Arabidopsis thaliana |
AT5G57860:three_prime_UTR:1 | 171 | Chr5: 23438475-23438645 | Arabidopsis thaliana |
AT5G57860:three_prime_UTR:2 | 283 | Chr5: 23439029-23439311 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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