External Links
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G56850:CDS:14 | 165 | Chr5: 22985531-22985695 | Arabidopsis thaliana |
AT5G56850:CDS:12 | 513 | Chr5: 22985779-22986291 | Arabidopsis thaliana |
AT5G56850:CDS:11 | 438 | Chr5: 22986381-22986818 | Arabidopsis thaliana |
AT5G56850:CDS:10 | 95 | Chr5: 22986910-22987004 | Arabidopsis thaliana |
AT5G56850:CDS:8 | 79 | Chr5: 22987117-22987195 | Arabidopsis thaliana |
AT5G56850:CDS:6 | 131 | Chr5: 22987290-22987420 | Arabidopsis thaliana |
AT5G56850:CDS:5 | 74 | Chr5: 22987499-22987572 | Arabidopsis thaliana |
AT5G56850:CDS:3 | 52 | Chr5: 22987670-22987721 | Arabidopsis thaliana |
AT5G56850:CDS:2 | 60 | Chr5: 22987800-22987859 | Arabidopsis thaliana |
AT5G56850:CDS:1 | 25 | Chr5: 22987953-22987977 | Arabidopsis thaliana |
AT5G56850:CDS:15 | 60 | Chr5: 22985432-22985491 | Arabidopsis thaliana |
AT5G56850:CDS:13 | 129 | Chr5: 22985567-22985695 | Arabidopsis thaliana |
AT5G56850:CDS:12.1 | 513 | Chr5: 22985779-22986291 | Arabidopsis thaliana |
AT5G56850:CDS:11.1 | 438 | Chr5: 22986381-22986818 | Arabidopsis thaliana |
AT5G56850:CDS:10.1 | 95 | Chr5: 22986910-22987004 | Arabidopsis thaliana |
AT5G56850:CDS:8.1 | 79 | Chr5: 22987117-22987195 | Arabidopsis thaliana |
AT5G56850:CDS:6.1 | 131 | Chr5: 22987290-22987420 | Arabidopsis thaliana |
AT5G56850:CDS:5.1 | 74 | Chr5: 22987499-22987572 | Arabidopsis thaliana |
AT5G56850:CDS:3.1 | 52 | Chr5: 22987670-22987721 | Arabidopsis thaliana |
AT5G56850:CDS:2.1 | 60 | Chr5: 22987800-22987859 | Arabidopsis thaliana |
AT5G56850:CDS:1.1 | 25 | Chr5: 22987953-22987977 | Arabidopsis thaliana |
AT5G56850:CDS:15.1 | 60 | Chr5: 22985432-22985491 | Arabidopsis thaliana |
AT5G56850:CDS:13.1 | 129 | Chr5: 22985567-22985695 | Arabidopsis thaliana |
AT5G56850:CDS:12.2 | 513 | Chr5: 22985779-22986291 | Arabidopsis thaliana |
AT5G56850:CDS:11.2 | 438 | Chr5: 22986381-22986818 | Arabidopsis thaliana |
AT5G56850:CDS:9 | 102 | Chr5: 22986910-22987011 | Arabidopsis thaliana |
AT5G56850:CDS:15.2 | 60 | Chr5: 22985432-22985491 | Arabidopsis thaliana |
AT5G56850:CDS:13.2 | 129 | Chr5: 22985567-22985695 | Arabidopsis thaliana |
AT5G56850:CDS:12.3 | 513 | Chr5: 22985779-22986291 | Arabidopsis thaliana |
AT5G56850:CDS:11.3 | 438 | Chr5: 22986381-22986818 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G56850:exon:24 | 581 | Chr5: 22985115-22985695 | Arabidopsis thaliana |
AT5G56850:exon:25 | 171 | Chr5: 22985115-22985285 | Arabidopsis thaliana |
AT5G56850:exon:3 | 140 | Chr5: 22987953-22988092 | Arabidopsis thaliana |
AT5G56850:exon:23 | 124 | Chr5: 22985162-22985285 | Arabidopsis thaliana |
AT5G56850:exon:12 | 286 | Chr5: 22986910-22987195 | Arabidopsis thaliana |
AT5G56850:exon:2 | 156 | Chr5: 22987953-22988108 | Arabidopsis thaliana |
AT5G56850:exon:13 | 285 | Chr5: 22986910-22987194 | Arabidopsis thaliana |
AT5G56850:exon:22 | 329 | Chr5: 22985163-22985491 | Arabidopsis thaliana |
AT5G56850:exon:7 | 74 | Chr5: 22987499-22987572 | Arabidopsis thaliana |
AT5G56850:exon:5 | 52 | Chr5: 22987670-22987721 | Arabidopsis thaliana |
AT5G56850:exon:4 | 60 | Chr5: 22987800-22987859 | Arabidopsis thaliana |
AT5G56850:exon:1 | 158 | Chr5: 22987953-22988110 | Arabidopsis thaliana |
AT5G56850:exon:14 | 120 | Chr5: 22986910-22987029 | Arabidopsis thaliana |
AT5G56850:exon:20 | 299 | Chr5: 22985193-22985491 | Arabidopsis thaliana |
AT5G56850:exon:9 | 135 | Chr5: 22987290-22987424 | Arabidopsis thaliana |
AT5G56850:exon:8 | 11 | Chr5: 22987499-22987509 | Arabidopsis thaliana |
AT5G56850:exon:21 | 93 | Chr5: 22985193-22985285 | Arabidopsis thaliana |
AT5G56850:exon:19 | 70 | Chr5: 22985422-22985491 | Arabidopsis thaliana |
AT5G56850:exon:18 | 129 | Chr5: 22985567-22985695 | Arabidopsis thaliana |
AT5G56850:exon:17 | 513 | Chr5: 22985779-22986291 | Arabidopsis thaliana |
AT5G56850:exon:16 | 438 | Chr5: 22986381-22986818 | Arabidopsis thaliana |
AT5G56850:exon:15 | 95 | Chr5: 22986910-22987004 | Arabidopsis thaliana |
AT5G56850:exon:11 | 79 | Chr5: 22987117-22987195 | Arabidopsis thaliana |
AT5G56850:exon:10 | 131 | Chr5: 22987290-22987420 | Arabidopsis thaliana |
AT5G56850:exon:6 | 129 | Chr5: 22987499-22987627 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G56850:five_prime_UTR:2 | 115 | Chr5: 22987978-22988092 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:11 | 184 | Chr5: 22987012-22987195 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:10 | 131 | Chr5: 22987290-22987420 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:7 | 74 | Chr5: 22987499-22987572 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:5 | 52 | Chr5: 22987670-22987721 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:4 | 60 | Chr5: 22987800-22987859 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:3 | 156 | Chr5: 22987953-22988108 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:12 | 183 | Chr5: 22987012-22987194 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:1 | 133 | Chr5: 22987978-22988110 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:13 | 18 | Chr5: 22987012-22987029 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:9 | 18 | Chr5: 22987407-22987424 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:8 | 11 | Chr5: 22987499-22987509 | Arabidopsis thaliana |
AT5G56850:five_prime_UTR:6 | 44 | Chr5: 22987584-22987627 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G56850.3 | 2163 | Chr5: 22985115-22988092 |
AT5G56850.1 | 1952 | Chr5: 22985115-22988092 |
AT5G56850.2 | 2033 | Chr5: 22985162-22988108 |
AT5G56850.5 | 1694 | Chr5: 22985163-22987194 |
AT5G56850.4 | 2058 | Chr5: 22985163-22988110 |
AT5G56850.8 | 1363 | Chr5: 22985193-22987029 |
AT5G56850.6 | 1699 | Chr5: 22985193-22987509 |
AT5G56850.7 | 1677 | Chr5: 22985193-22987627 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G56850:three_prime_UTR:6 | 416 | Chr5: 22985115-22985530 | Arabidopsis thaliana |
AT5G56850:three_prime_UTR:7 | 171 | Chr5: 22985115-22985285 | Arabidopsis thaliana |
AT5G56850:three_prime_UTR:5 | 124 | Chr5: 22985162-22985285 | Arabidopsis thaliana |
AT5G56850:three_prime_UTR:4 | 269 | Chr5: 22985163-22985431 | Arabidopsis thaliana |
AT5G56850:three_prime_UTR:2 | 239 | Chr5: 22985193-22985431 | Arabidopsis thaliana |
AT5G56850:three_prime_UTR:3 | 93 | Chr5: 22985193-22985285 | Arabidopsis thaliana |
AT5G56850:three_prime_UTR:1 | 10 | Chr5: 22985422-22985431 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...