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Gene : AT5G55400 A. thaliana

DB identifier  ? AT5G55400 Secondary Identifier  ? locus:2173867
Brief Description  Actin binding Calponin homology (CH) domain-containing protein
TAIR Computational Description  Actin binding Calponin homology (CH) domain-containing protein;(source:Araport11)
TAIR Curator Summary  Encodes a member of the fimbrin family. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles.
TAIR Short Description  Actin binding Calponin homology (CH) domain-containing protein
TAIR Aliases  AtFIM4

1 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4230  
Location: Chr5:22455369-22459598 reverse strand

Gene models - AT5G55400 AT5G55400

? Gene models

Transcripts: 3  Exons: 45  Introns: 42 

Overlapping Features

? Genome features that overlap coordinates of this Gene

22 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
FIMB3_ARATH function Cross-links actin filaments (F-actin). Stabilizes and prevents F-actin depolymerization mediated by profilin. May regulate actin cytoarchitecture, cell cycle, cell division, cell elongation and cytoplasmic tractus.

1 Proteins

Function

Gene Ontology

cellular component
plant-type vacuole  ? ECO  
cytoskeleton  ? ECO  
molecular function
metal ion binding  ? ECO  
actin filament binding  ? ECO  
biological process
actin filament network formation  ? ECO  
actin filament bundle assembly  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets