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Gene : AT5G55220 A. thaliana

DB identifier  ? AT5G55220 Secondary Identifier  ? locus:2161640
Brief Description  trigger factor type chaperone family protein
TAIR Computational Description  trigger factor type chaperone family protein;(source:Araport11)
TAIR Curator Summary  Contains with HP22 a protein that is related to the bacterial trigger factor chaperone. Plants depleted of either HP22 or HP65b or even both were increasingly delayed in leaf senescence and retained much longer stromal chloroplast constituents than wild-type plants.
TAIR Short Description  trigger factor type chaperone family protein
TAIR Aliases  HP65b, TIG1

0 Gene Rifs

1 Organism

20 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3400  
Location: Chr5:22397457-22400856

Gene models - AT5G55220 AT5G55220

? Gene models

Transcripts: 1  Exons: 13  Introns: 12 

Overlapping Features

? Genome features that overlap coordinates of this Gene

14 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TIG_ARATH function Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase (By similarity).
TIG_ARATH similarity Belongs to the FKBP-type PPIase family. Tig subfamily.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast stroma  ? ECO  
plastid  ? ECO  
chloroplast envelope  ? ECO  
chloroplast  ? ECO  
molecular function
protein folding chaperone  ? ECO  
ribosome binding  ? ECO  
peptidyl-prolyl cis-trans isomerase activity  ? ECO  
mRNA binding  ? ECO  
biological process
protein unfolding  ? ECO  
chaperone-mediated protein folding  ? ECO  
protein transport  ? ECO  
'de novo' cotranslational protein folding  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets