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Gene : AT5G54930 A. thaliana

DB identifier  ? AT5G54930 Secondary Identifier  ? locus:2160240
Brief Description  AT hook motif-containing protein
TAIR Computational Description  AT hook motif-containing protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  AT hook motif-containing protein
TAIR Aliases  MNM1

0 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1837  
Location: Chr5:22305733-22307569 reverse strand

Gene models - AT5G54930 AT5G54930

? Gene models

Transcripts: 2  Exons: 6  Introns: 4 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
MNM1_ARATH MNM1_ARATH-2 developmental stage In young seedlings, mostly expressed in the newly emerging leaves and in the vasculature of roots and cotyledons (PubMed:25202318). Later fades out of the vasculature but remains at high levels in emerging leaves (PubMed:25202318). Present at the base of maturing leaves but excluded from the vasculature (PubMed:25202318). In short days conditions, accumulates in newly emerging leaves, but as these leaves mature, gradually lost in the lamina until being confined to the margin (PubMed:25202318). Disapears in mature leaves (PubMed:25202318).
MNM1_ARATH MNM1_ARATH-2 function Lineage-specific modulator of primary metabolism (PubMed:25202318). Influences flowering time (PubMed:25202318).
MNM1_ARATH MNM1_ARATH-2 tissue specificity Mailny observed in young seedlings and in emerging leaves.

3 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
transcription cis-regulatory region binding  ? ECO  
biological process
regulation of photoperiodism, flowering  ? ECO  
primary metabolic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets