help  | faq  | software  | BAR
Hide

Oops!

Error: 403

Gene : AT5G54580 A. thaliana

DB identifier  ? AT5G54580 Secondary Identifier  ? locus:2172144
Brief Description  RNA-binding (RRM/RBD/RNP motifs) family protein
TAIR Computational Description  RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)
TAIR Curator Summary  Encodes an RNA recognition motif (RRM) and is involved in C-> U RNA editing in mitochondria.
TAIR Short Description  RNA-binding (RRM/RBD/RNP motifs) family protein
TAIR Aliases  ORRM2

0 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1854  
Location: Chr5:22171166-22173019

Gene models - AT5G54580 AT5G54580

? Gene models

Transcripts: 1  Exons: 4  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ORRM2_ARATH function Involved in C-to-U editing of mitochondrial RNA. Functions as minor mitochondrial editing factor. Controls 6 percent of the mitochondrial editing sites.

1 Proteins

Function

Gene Ontology

cellular component
mitochondrion  ? ECO  
molecular function
mRNA binding  ? ECO  
biological process
mRNA processing  ? ECO  
mitochondrial mRNA modification  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets