help  | faq  | software  | BAR
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : DFL1 A. thaliana

DB identifier  ? AT5G54510 Secondary Identifier  ? locus:2147314
Name  ? DWARF IN LIGHT 1 Brief Description  Auxin-responsive GH3 family protein
TAIR Computational Description  Auxin-responsive GH3 family protein;(source:Araport11)
TAIR Curator Summary  Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).
TAIR Short Description  Auxin-responsive GH3 family protein
TAIR Aliases  DFL1, GH3.6

1 Gene Rifs

1 Organism

29 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2725  
Location: Chr5:22130964-22133688 reverse strand

Gene models - DFL1 AT5G54510

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
GH36_ARATH function Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin. Strongly reactive with Glu, Gln, Trp, Asp, Ala, Leu, Phe, Gly, Tyr, Met, Ile and Val. Little or no product formation with His, Ser, Thr, Arg, Lys, or Cys. Also active on pyruvic and butyric acid analogs of IAA, PAA and the synthetic auxin naphthaleneacetic acid (NAA). The two chlorinated synthetic auxin herbicides 2,4-D and 3,6-dichloro-o-anisic acid (dicamba) cannot be used as substrates (PubMed:15659623). Involved in auxin signal transduction. Inhibits shoot and hypocotyl cell elongation, and lateral root cell differentiation in light (PubMed:11169197).
GH36_ARATH similarity Belongs to the IAA-amido conjugating enzyme family.
GH36_ARATH tissue specificity Expressed in cotyledons, stipules, true leaves, hypocotyls, and all parts of the roots. Not detected in flowers.

1 Proteins

Function

Gene Ontology

cellular component
cytoplasm  ? ECO  
molecular function
indole-3-acetic acid amido synthetase activity  ? ECO  
biological process
unidimensional cell growth  ? ECO  
response to auxin  ? ECO  
auxin-activated signaling pathway  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets