External Links
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53020:CDS:1 | 41 | Chr5: 21498565-21498605 | Arabidopsis thaliana |
AT5G53020:CDS:3 | 863 | Chr5: 21499967-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:CDS:6 | 381 | Chr5: 21501855-21502235 | Arabidopsis thaliana |
AT5G53020:CDS:2 | 931 | Chr5: 21499899-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4.1 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:CDS:6.1 | 381 | Chr5: 21501855-21502235 | Arabidopsis thaliana |
AT5G53020:CDS:2.1 | 931 | Chr5: 21499899-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4.2 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:CDS:6.2 | 381 | Chr5: 21501855-21502235 | Arabidopsis thaliana |
AT5G53020:CDS:2.2 | 931 | Chr5: 21499899-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4.3 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:CDS:6.3 | 381 | Chr5: 21501855-21502235 | Arabidopsis thaliana |
AT5G53020:CDS:2.3 | 931 | Chr5: 21499899-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4.4 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:CDS:6.4 | 381 | Chr5: 21501855-21502235 | Arabidopsis thaliana |
AT5G53020:CDS:2.4 | 931 | Chr5: 21499899-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4.5 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:CDS:5 | 384 | Chr5: 21501852-21502235 | Arabidopsis thaliana |
AT5G53020:CDS:2.5 | 931 | Chr5: 21499899-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4.6 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:CDS:5.1 | 384 | Chr5: 21501852-21502235 | Arabidopsis thaliana |
AT5G53020:CDS:2.6 | 931 | Chr5: 21499899-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4.7 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:CDS:6.5 | 381 | Chr5: 21501855-21502235 | Arabidopsis thaliana |
AT5G53020:CDS:2.7 | 931 | Chr5: 21499899-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4.8 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:CDS:6.6 | 381 | Chr5: 21501855-21502235 | Arabidopsis thaliana |
AT5G53020:CDS:2.8 | 931 | Chr5: 21499899-21500829 | Arabidopsis thaliana |
AT5G53020:CDS:4.9 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53020:exon:1 | 227 | Chr5: 21498379-21498605 | Arabidopsis thaliana |
AT5G53020:exon:13 | 863 | Chr5: 21499967-21500829 | Arabidopsis thaliana |
AT5G53020:exon:2 | 215 | Chr5: 21498391-21498605 | Arabidopsis thaliana |
AT5G53020:exon:20 | 646 | Chr5: 21501855-21502500 | Arabidopsis thaliana |
AT5G53020:exon:3 | 183 | Chr5: 21498423-21498605 | Arabidopsis thaliana |
AT5G53020:exon:4 | 1018 | Chr5: 21498423-21499440 | Arabidopsis thaliana |
AT5G53020:exon:11 | 1035 | Chr5: 21499795-21500829 | Arabidopsis thaliana |
AT5G53020:exon:16 | 547 | Chr5: 21501855-21502401 | Arabidopsis thaliana |
AT5G53020:exon:8 | 150 | Chr5: 21499291-21499440 | Arabidopsis thaliana |
AT5G53020:exon:18 | 562 | Chr5: 21501855-21502416 | Arabidopsis thaliana |
AT5G53020:exon:6 | 1017 | Chr5: 21498424-21499440 | Arabidopsis thaliana |
AT5G53020:exon:15 | 565 | Chr5: 21501852-21502416 | Arabidopsis thaliana |
AT5G53020:exon:5 | 182 | Chr5: 21498424-21498605 | Arabidopsis thaliana |
AT5G53020:exon:9 | 1539 | Chr5: 21499291-21500829 | Arabidopsis thaliana |
AT5G53020:exon:7 | 2406 | Chr5: 21498424-21500829 | Arabidopsis thaliana |
AT5G53020:exon:19 | 626 | Chr5: 21501855-21502480 | Arabidopsis thaliana |
AT5G53020:exon:10 | 24 | Chr5: 21499417-21499440 | Arabidopsis thaliana |
AT5G53020:exon:12 | 941 | Chr5: 21499889-21500829 | Arabidopsis thaliana |
AT5G53020:exon:14 | 851 | Chr5: 21500917-21501767 | Arabidopsis thaliana |
AT5G53020:exon:17 | 550 | Chr5: 21501855-21502404 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53020:five_prime_UTR:1 | 186 | Chr5: 21498379-21498564 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:2 | 215 | Chr5: 21498391-21498605 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:3 | 183 | Chr5: 21498423-21498605 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:4 | 1018 | Chr5: 21498423-21499440 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:11 | 104 | Chr5: 21499795-21499898 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:8 | 150 | Chr5: 21499291-21499440 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:6 | 1017 | Chr5: 21498424-21499440 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:5 | 182 | Chr5: 21498424-21498605 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:9 | 608 | Chr5: 21499291-21499898 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:7 | 1475 | Chr5: 21498424-21499898 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:10 | 24 | Chr5: 21499417-21499440 | Arabidopsis thaliana |
AT5G53020:five_prime_UTR:12 | 10 | Chr5: 21499889-21499898 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G53020.2 | 2488 | Chr5: 21498379-21502401 |
AT5G53020.3 | 2747 | Chr5: 21498391-21502500 |
AT5G53020.1 | 2766 | Chr5: 21498423-21502401 |
AT5G53020.4 | 3451 | Chr5: 21498423-21502401 |
AT5G53020.9 | 2686 | Chr5: 21498424-21502416 |
AT5G53020.7 | 3374 | Chr5: 21498424-21502416 |
AT5G53020.6 | 3822 | Chr5: 21498424-21502416 |
AT5G53020.8 | 3198 | Chr5: 21498424-21502480 |
AT5G53020.5 | 3883 | Chr5: 21498424-21502480 |
AT5G53020.10 | 2366 | Chr5: 21499417-21502404 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53020:three_prime_UTR:5 | 265 | Chr5: 21502236-21502500 | Arabidopsis thaliana |
AT5G53020:three_prime_UTR:1 | 166 | Chr5: 21502236-21502401 | Arabidopsis thaliana |
AT5G53020:three_prime_UTR:3 | 181 | Chr5: 21502236-21502416 | Arabidopsis thaliana |
AT5G53020:three_prime_UTR:4 | 245 | Chr5: 21502236-21502480 | Arabidopsis thaliana |
AT5G53020:three_prime_UTR:2 | 169 | Chr5: 21502236-21502404 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...